Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Cstf1Q99LC2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cstf1Q99LC2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cstf1Q99LC2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cstf1Q99LC2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
Cstf1Q99LC2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cstf1Q99LC2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cstf1Q99LC2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Cstf1Q99LC2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Cstf1Q99LC2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Cstf1Q99LC2 Gm18671-201ENSMUST00000214826 683 ntBASIC20.44■□□□□ 0.86
Cstf1Q99LC2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Cstf1Q99LC2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cstf1Q99LC2 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.44■□□□□ 0.86
Cstf1Q99LC2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cstf1Q99LC2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cstf1Q99LC2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cstf1Q99LC2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cstf1Q99LC2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cstf1Q99LC2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cstf1Q99LC2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.43■□□□□ 0.86
Cstf1Q99LC2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cstf1Q99LC2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cstf1Q99LC2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Cstf1Q99LC2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cstf1Q99LC2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cstf1Q99LC2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cstf1Q99LC2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cstf1Q99LC2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cstf1Q99LC2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cstf1Q99LC2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cstf1Q99LC2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cstf1Q99LC2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.41■□□□□ 0.86
Cstf1Q99LC2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cstf1Q99LC2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Cstf1Q99LC2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cstf1Q99LC2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cstf1Q99LC2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Cstf1Q99LC2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.4■□□□□ 0.86
Cstf1Q99LC2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cstf1Q99LC2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.4■□□□□ 0.86
Cstf1Q99LC2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Cstf1Q99LC2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cstf1Q99LC2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cstf1Q99LC2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cstf1Q99LC2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cstf1Q99LC2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.39■□□□□ 0.85
Cstf1Q99LC2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cstf1Q99LC2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.39■□□□□ 0.85
Cstf1Q99LC2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cstf1Q99LC2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cstf1Q99LC2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cstf1Q99LC2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cstf1Q99LC2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cstf1Q99LC2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cstf1Q99LC2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
Cstf1Q99LC2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
Cstf1Q99LC2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.38■□□□□ 0.85
Cstf1Q99LC2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cstf1Q99LC2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cstf1Q99LC2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cstf1Q99LC2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Cstf1Q99LC2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cstf1Q99LC2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.37■□□□□ 0.85
Cstf1Q99LC2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cstf1Q99LC2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cstf1Q99LC2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Cstf1Q99LC2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cstf1Q99LC2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Cstf1Q99LC2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.37■□□□□ 0.85
Cstf1Q99LC2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Cstf1Q99LC2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.37■□□□□ 0.85
Cstf1Q99LC2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cstf1Q99LC2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Cstf1Q99LC2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cstf1Q99LC2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.36■□□□□ 0.85
Cstf1Q99LC2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.36■□□□□ 0.85
Cstf1Q99LC2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.36■□□□□ 0.85
Cstf1Q99LC2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cstf1Q99LC2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cstf1Q99LC2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.36■□□□□ 0.85
Cstf1Q99LC2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cstf1Q99LC2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cstf1Q99LC2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cstf1Q99LC2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Cstf1Q99LC2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cstf1Q99LC2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Cstf1Q99LC2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cstf1Q99LC2 AV356131-201ENSMUST00000206201 750 ntBASIC20.35■□□□□ 0.85
Cstf1Q99LC2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.35■□□□□ 0.85
Cstf1Q99LC2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cstf1Q99LC2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cstf1Q99LC2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cstf1Q99LC2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cstf1Q99LC2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cstf1Q99LC2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cstf1Q99LC2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Cstf1Q99LC2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cstf1Q99LC2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.34■□□□□ 0.85
Cstf1Q99LC2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms