Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Thumpd1Q99J36 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Thumpd1Q99J36 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.21■□□□□ 0.51
Thumpd1Q99J36 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Thumpd1Q99J36 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thumpd1Q99J36 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thumpd1Q99J36 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thumpd1Q99J36 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd1Q99J36 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd1Q99J36 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd1Q99J36 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd1Q99J36 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd1Q99J36 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd1Q99J36 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.2■□□□□ 0.5
Thumpd1Q99J36 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Thumpd1Q99J36 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd1Q99J36 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Thumpd1Q99J36 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Thumpd1Q99J36 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd1Q99J36 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd1Q99J36 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd1Q99J36 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd1Q99J36 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd1Q99J36 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.19■□□□□ 0.5
Thumpd1Q99J36 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Thumpd1Q99J36 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd1Q99J36 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd1Q99J36 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd1Q99J36 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd1Q99J36 Iqck-206ENSMUST00000208658 2891 ntBASIC18.18■□□□□ 0.5
Thumpd1Q99J36 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd1Q99J36 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd1Q99J36 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.18■□□□□ 0.5
Thumpd1Q99J36 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Thumpd1Q99J36 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd1Q99J36 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.18■□□□□ 0.5
Thumpd1Q99J36 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Thumpd1Q99J36 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd1Q99J36 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Thumpd1Q99J36 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd1Q99J36 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd1Q99J36 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Thumpd1Q99J36 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Thumpd1Q99J36 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Thumpd1Q99J36 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Thumpd1Q99J36 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Thumpd1Q99J36 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Thumpd1Q99J36 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Thumpd1Q99J36 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Thumpd1Q99J36 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Thumpd1Q99J36 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Thumpd1Q99J36 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Thumpd1Q99J36 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Thumpd1Q99J36 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Thumpd1Q99J36 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd1Q99J36 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.15■□□□□ 0.5
Thumpd1Q99J36 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd1Q99J36 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd1Q99J36 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd1Q99J36 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Thumpd1Q99J36 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.15■□□□□ 0.5
Thumpd1Q99J36 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Thumpd1Q99J36 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd1Q99J36 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd1Q99J36 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd1Q99J36 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd1Q99J36 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd1Q99J36 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Thumpd1Q99J36 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Thumpd1Q99J36 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Thumpd1Q99J36 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Thumpd1Q99J36 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Thumpd1Q99J36 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Thumpd1Q99J36 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Thumpd1Q99J36 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Thumpd1Q99J36 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Thumpd1Q99J36 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Thumpd1Q99J36 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Thumpd1Q99J36 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Thumpd1Q99J36 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Thumpd1Q99J36 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.13■□□□□ 0.49
Thumpd1Q99J36 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Thumpd1Q99J36 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Thumpd1Q99J36 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Thumpd1Q99J36 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.13■□□□□ 0.49
Thumpd1Q99J36 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Thumpd1Q99J36 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Thumpd1Q99J36 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Thumpd1Q99J36 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Thumpd1Q99J36 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Thumpd1Q99J36 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.12■□□□□ 0.49
Thumpd1Q99J36 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.12■□□□□ 0.49
Thumpd1Q99J36 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Thumpd1Q99J36 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Thumpd1Q99J36 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Thumpd1Q99J36 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Thumpd1Q99J36 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Thumpd1Q99J36 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Thumpd1Q99J36 Golph3-202ENSMUST00000226517 2359 ntBASIC18.11■□□□□ 0.49
Thumpd1Q99J36 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms