Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdha2Q91Y17 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdha2Q91Y17 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdha2Q91Y17 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdha2Q91Y17 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdha2Q91Y17 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdha2Q91Y17 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Pcdha2Q91Y17 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.92■■□□□ 1.1
Pcdha2Q91Y17 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha2Q91Y17 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.92■■□□□ 1.1
Pcdha2Q91Y17 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.92■■□□□ 1.1
Pcdha2Q91Y17 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.92■■□□□ 1.1
Pcdha2Q91Y17 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha2Q91Y17 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha2Q91Y17 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdha2Q91Y17 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.91■■□□□ 1.1
Pcdha2Q91Y17 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdha2Q91Y17 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdha2Q91Y17 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
Pcdha2Q91Y17 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdha2Q91Y17 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdha2Q91Y17 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha2Q91Y17 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha2Q91Y17 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha2Q91Y17 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Pcdha2Q91Y17 Gm21956-201ENSMUST00000179946 522 ntBASIC21.9■■□□□ 1.1
Pcdha2Q91Y17 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.9■■□□□ 1.1
Pcdha2Q91Y17 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha2Q91Y17 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha2Q91Y17 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.9■■□□□ 1.1
Pcdha2Q91Y17 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha2Q91Y17 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdha2Q91Y17 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha2Q91Y17 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.89■■□□□ 1.09
Pcdha2Q91Y17 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha2Q91Y17 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha2Q91Y17 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha2Q91Y17 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha2Q91Y17 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha2Q91Y17 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha2Q91Y17 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Pcdha2Q91Y17 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha2Q91Y17 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha2Q91Y17 Gm43530-201ENSMUST00000195920 274 ntBASIC21.88■■□□□ 1.09
Pcdha2Q91Y17 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha2Q91Y17 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha2Q91Y17 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha2Q91Y17 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.88■■□□□ 1.09
Pcdha2Q91Y17 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Pcdha2Q91Y17 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdha2Q91Y17 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdha2Q91Y17 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdha2Q91Y17 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Pcdha2Q91Y17 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha2Q91Y17 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha2Q91Y17 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha2Q91Y17 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Pcdha2Q91Y17 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Pcdha2Q91Y17 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha2Q91Y17 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha2Q91Y17 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha2Q91Y17 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha2Q91Y17 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.85■■□□□ 1.09
Pcdha2Q91Y17 Gm13241-201ENSMUST00000094493 780 ntBASIC21.85■■□□□ 1.09
Pcdha2Q91Y17 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha2Q91Y17 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha2Q91Y17 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.84■■□□□ 1.09
Pcdha2Q91Y17 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha2Q91Y17 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha2Q91Y17 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha2Q91Y17 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.84■■□□□ 1.09
Pcdha2Q91Y17 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.84■■□□□ 1.09
Pcdha2Q91Y17 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha2Q91Y17 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha2Q91Y17 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha2Q91Y17 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha2Q91Y17 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdha2Q91Y17 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdha2Q91Y17 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Pcdha2Q91Y17 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdha2Q91Y17 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdha2Q91Y17 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdha2Q91Y17 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.83■■□□□ 1.08
Pcdha2Q91Y17 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdha2Q91Y17 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.82■■□□□ 1.08
Pcdha2Q91Y17 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha2Q91Y17 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha2Q91Y17 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha2Q91Y17 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha2Q91Y17 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha2Q91Y17 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha2Q91Y17 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha2Q91Y17 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Pcdha2Q91Y17 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Pcdha2Q91Y17 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.81■■□□□ 1.08
Pcdha2Q91Y17 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.8■■□□□ 1.08
Pcdha2Q91Y17 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdha2Q91Y17 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdha2Q91Y17 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Pcdha2Q91Y17 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms