Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb3Q91XZ7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb3Q91XZ7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb3Q91XZ7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Pcdhb3Q91XZ7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.24■□□□□ 0.83
Pcdhb3Q91XZ7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb3Q91XZ7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb3Q91XZ7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb3Q91XZ7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb3Q91XZ7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb3Q91XZ7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb3Q91XZ7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb3Q91XZ7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pcdhb3Q91XZ7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb3Q91XZ7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhb3Q91XZ7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb3Q91XZ7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pcdhb3Q91XZ7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb3Q91XZ7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb3Q91XZ7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb3Q91XZ7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb3Q91XZ7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb3Q91XZ7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb3Q91XZ7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pcdhb3Q91XZ7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb3Q91XZ7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pcdhb3Q91XZ7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb3Q91XZ7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb3Q91XZ7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb3Q91XZ7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcdhb3Q91XZ7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb3Q91XZ7 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.21■□□□□ 0.83
Pcdhb3Q91XZ7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb3Q91XZ7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb3Q91XZ7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb3Q91XZ7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb3Q91XZ7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Pcdhb3Q91XZ7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Pcdhb3Q91XZ7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.2■□□□□ 0.82
Pcdhb3Q91XZ7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb3Q91XZ7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.2■□□□□ 0.82
Pcdhb3Q91XZ7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb3Q91XZ7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.2■□□□□ 0.82
Pcdhb3Q91XZ7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb3Q91XZ7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
Pcdhb3Q91XZ7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhb3Q91XZ7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb3Q91XZ7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb3Q91XZ7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb3Q91XZ7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.2■□□□□ 0.82
Pcdhb3Q91XZ7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhb3Q91XZ7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb3Q91XZ7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdhb3Q91XZ7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb3Q91XZ7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Pcdhb3Q91XZ7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb3Q91XZ7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb3Q91XZ7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.19■□□□□ 0.82
Pcdhb3Q91XZ7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb3Q91XZ7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb3Q91XZ7 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.19■□□□□ 0.82
Pcdhb3Q91XZ7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pcdhb3Q91XZ7 Gm5812-201ENSMUST00000061073 957 ntBASIC20.19■□□□□ 0.82
Pcdhb3Q91XZ7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb3Q91XZ7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdhb3Q91XZ7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb3Q91XZ7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhb3Q91XZ7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhb3Q91XZ7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb3Q91XZ7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb3Q91XZ7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb3Q91XZ7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb3Q91XZ7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb3Q91XZ7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb3Q91XZ7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb3Q91XZ7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb3Q91XZ7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb3Q91XZ7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Pcdhb3Q91XZ7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.17■□□□□ 0.82
Pcdhb3Q91XZ7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb3Q91XZ7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Pcdhb3Q91XZ7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb3Q91XZ7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb3Q91XZ7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Pcdhb3Q91XZ7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.17■□□□□ 0.82
Pcdhb3Q91XZ7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb3Q91XZ7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb3Q91XZ7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pcdhb3Q91XZ7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb3Q91XZ7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb3Q91XZ7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb3Q91XZ7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb3Q91XZ7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.16■□□□□ 0.82
Pcdhb3Q91XZ7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb3Q91XZ7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb3Q91XZ7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb3Q91XZ7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.15■□□□□ 0.82
Pcdhb3Q91XZ7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb3Q91XZ7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb3Q91XZ7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms