Protein–RNA interactions for Protein: Q91VE5

Pcdhb10, Protocadherin beta 10, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb10Q91VE5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb10Q91VE5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb10Q91VE5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb10Q91VE5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcdhb10Q91VE5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb10Q91VE5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb10Q91VE5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb10Q91VE5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb10Q91VE5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pcdhb10Q91VE5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb10Q91VE5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb10Q91VE5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pcdhb10Q91VE5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb10Q91VE5 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.2■□□□□ 0.82
Pcdhb10Q91VE5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhb10Q91VE5 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Pcdhb10Q91VE5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb10Q91VE5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb10Q91VE5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb10Q91VE5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb10Q91VE5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb10Q91VE5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb10Q91VE5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb10Q91VE5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb10Q91VE5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pcdhb10Q91VE5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb10Q91VE5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb10Q91VE5 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb10Q91VE5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb10Q91VE5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb10Q91VE5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdhb10Q91VE5 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.19■□□□□ 0.82
Pcdhb10Q91VE5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb10Q91VE5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb10Q91VE5 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb10Q91VE5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb10Q91VE5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb10Q91VE5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pcdhb10Q91VE5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pcdhb10Q91VE5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb10Q91VE5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb10Q91VE5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb10Q91VE5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb10Q91VE5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb10Q91VE5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb10Q91VE5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb10Q91VE5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.17■□□□□ 0.82
Pcdhb10Q91VE5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb10Q91VE5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb10Q91VE5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb10Q91VE5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb10Q91VE5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb10Q91VE5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb10Q91VE5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.16■□□□□ 0.82
Pcdhb10Q91VE5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb10Q91VE5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb10Q91VE5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Pcdhb10Q91VE5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb10Q91VE5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb10Q91VE5 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Pcdhb10Q91VE5 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb10Q91VE5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb10Q91VE5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb10Q91VE5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pcdhb10Q91VE5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.16■□□□□ 0.82
Pcdhb10Q91VE5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb10Q91VE5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb10Q91VE5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.15■□□□□ 0.82
Pcdhb10Q91VE5 Gm43566-201ENSMUST00000196851 808 ntBASIC20.15■□□□□ 0.82
Pcdhb10Q91VE5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb10Q91VE5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb10Q91VE5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb10Q91VE5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb10Q91VE5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb10Q91VE5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb10Q91VE5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdhb10Q91VE5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb10Q91VE5 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb10Q91VE5 Gm13238-201ENSMUST00000117655 780 ntBASIC20.14■□□□□ 0.81
Pcdhb10Q91VE5 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb10Q91VE5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb10Q91VE5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb10Q91VE5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.13■□□□□ 0.81
Pcdhb10Q91VE5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Pcdhb10Q91VE5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb10Q91VE5 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb10Q91VE5 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb10Q91VE5 Gm5921-201ENSMUST00000075898 882 ntBASIC20.13■□□□□ 0.81
Pcdhb10Q91VE5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb10Q91VE5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb10Q91VE5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb10Q91VE5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Pcdhb10Q91VE5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Pcdhb10Q91VE5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Pcdhb10Q91VE5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb10Q91VE5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb10Q91VE5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb10Q91VE5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb10Q91VE5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.12■□□□□ 0.81
Pcdhb10Q91VE5 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms