Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tram1Q91V04 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tram1Q91V04 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tram1Q91V04 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.55■□□□□ 0.4
Tram1Q91V04 Golph3-202ENSMUST00000226517 2359 ntBASIC17.54■□□□□ 0.4
Tram1Q91V04 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tram1Q91V04 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tram1Q91V04 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tram1Q91V04 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.54■□□□□ 0.4
Tram1Q91V04 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tram1Q91V04 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tram1Q91V04 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.54■□□□□ 0.4
Tram1Q91V04 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tram1Q91V04 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tram1Q91V04 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Tram1Q91V04 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.54■□□□□ 0.4
Tram1Q91V04 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tram1Q91V04 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tram1Q91V04 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tram1Q91V04 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tram1Q91V04 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tram1Q91V04 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tram1Q91V04 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tram1Q91V04 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tram1Q91V04 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Tram1Q91V04 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tram1Q91V04 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tram1Q91V04 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tram1Q91V04 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tram1Q91V04 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tram1Q91V04 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tram1Q91V04 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tram1Q91V04 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tram1Q91V04 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tram1Q91V04 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Tram1Q91V04 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tram1Q91V04 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tram1Q91V04 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Tram1Q91V04 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Tram1Q91V04 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.52■□□□□ 0.4
Tram1Q91V04 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.52■□□□□ 0.4
Tram1Q91V04 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.52■□□□□ 0.4
Tram1Q91V04 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tram1Q91V04 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tram1Q91V04 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Tram1Q91V04 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tram1Q91V04 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tram1Q91V04 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tram1Q91V04 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Tram1Q91V04 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Tram1Q91V04 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tram1Q91V04 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tram1Q91V04 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tram1Q91V04 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tram1Q91V04 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Tram1Q91V04 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Tram1Q91V04 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tram1Q91V04 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tram1Q91V04 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.5■□□□□ 0.39
Tram1Q91V04 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Tram1Q91V04 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.5■□□□□ 0.39
Tram1Q91V04 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.5■□□□□ 0.39
Tram1Q91V04 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tram1Q91V04 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tram1Q91V04 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tram1Q91V04 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tram1Q91V04 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tram1Q91V04 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tram1Q91V04 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tram1Q91V04 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tram1Q91V04 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Tram1Q91V04 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.49■□□□□ 0.39
Tram1Q91V04 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tram1Q91V04 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tram1Q91V04 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Tram1Q91V04 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tram1Q91V04 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tram1Q91V04 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tram1Q91V04 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tram1Q91V04 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.48■□□□□ 0.39
Tram1Q91V04 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tram1Q91V04 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tram1Q91V04 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tram1Q91V04 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tram1Q91V04 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tram1Q91V04 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tram1Q91V04 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Tram1Q91V04 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tram1Q91V04 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tram1Q91V04 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tram1Q91V04 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tram1Q91V04 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tram1Q91V04 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tram1Q91V04 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tram1Q91V04 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.47■□□□□ 0.39
Tram1Q91V04 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tram1Q91V04 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.47■□□□□ 0.39
Tram1Q91V04 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tram1Q91V04 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.46■□□□□ 0.39
Tram1Q91V04 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms