Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
StrcQ8VIM6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
StrcQ8VIM6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
StrcQ8VIM6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC25.14■■□□□ 1.62
StrcQ8VIM6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
StrcQ8VIM6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
StrcQ8VIM6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
StrcQ8VIM6 Gm12933-201ENSMUST00000120203 872 ntBASIC25.14■■□□□ 1.61
StrcQ8VIM6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
StrcQ8VIM6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC25.14■■□□□ 1.61
StrcQ8VIM6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
StrcQ8VIM6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC25.13■■□□□ 1.61
StrcQ8VIM6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
StrcQ8VIM6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
StrcQ8VIM6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
StrcQ8VIM6 Gm11421-201ENSMUST00000122124 294 ntBASIC25.12■■□□□ 1.61
StrcQ8VIM6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
StrcQ8VIM6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
StrcQ8VIM6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
StrcQ8VIM6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
StrcQ8VIM6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
StrcQ8VIM6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
StrcQ8VIM6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC25.12■■□□□ 1.61
StrcQ8VIM6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
StrcQ8VIM6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
StrcQ8VIM6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC25.11■■□□□ 1.61
StrcQ8VIM6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
StrcQ8VIM6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
StrcQ8VIM6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
StrcQ8VIM6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
StrcQ8VIM6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC25.09■■□□□ 1.61
StrcQ8VIM6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
StrcQ8VIM6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
StrcQ8VIM6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
StrcQ8VIM6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC25.09■■□□□ 1.61
StrcQ8VIM6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
StrcQ8VIM6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
StrcQ8VIM6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
StrcQ8VIM6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
StrcQ8VIM6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
StrcQ8VIM6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
StrcQ8VIM6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
StrcQ8VIM6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
StrcQ8VIM6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
StrcQ8VIM6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
StrcQ8VIM6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
StrcQ8VIM6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
StrcQ8VIM6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
StrcQ8VIM6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC25.08■■□□□ 1.6
StrcQ8VIM6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
StrcQ8VIM6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
StrcQ8VIM6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
StrcQ8VIM6 Nespas-201ENSMUST00000143738 1083 ntBASIC25.06■■□□□ 1.6
StrcQ8VIM6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
StrcQ8VIM6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC25.06■■□□□ 1.6
StrcQ8VIM6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
StrcQ8VIM6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
StrcQ8VIM6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
StrcQ8VIM6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
StrcQ8VIM6 Gm27045-201ENSMUST00000182145 1402 ntBASIC25.05■■□□□ 1.6
StrcQ8VIM6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC25.05■■□□□ 1.6
StrcQ8VIM6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
StrcQ8VIM6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
StrcQ8VIM6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
StrcQ8VIM6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
StrcQ8VIM6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC25.04■■□□□ 1.6
StrcQ8VIM6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
StrcQ8VIM6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
StrcQ8VIM6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
StrcQ8VIM6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
StrcQ8VIM6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
StrcQ8VIM6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
StrcQ8VIM6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
StrcQ8VIM6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
StrcQ8VIM6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
StrcQ8VIM6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
StrcQ8VIM6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
StrcQ8VIM6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC25.02■■□□□ 1.6
StrcQ8VIM6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
StrcQ8VIM6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
StrcQ8VIM6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
StrcQ8VIM6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
StrcQ8VIM6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
StrcQ8VIM6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
StrcQ8VIM6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
StrcQ8VIM6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
StrcQ8VIM6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
StrcQ8VIM6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
StrcQ8VIM6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
StrcQ8VIM6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
StrcQ8VIM6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
StrcQ8VIM6 Gm10653-202ENSMUST00000139570 835 ntBASIC25■■□□□ 1.59
StrcQ8VIM6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC25■■□□□ 1.59
StrcQ8VIM6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC25■■□□□ 1.59
StrcQ8VIM6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
StrcQ8VIM6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC25■■□□□ 1.59
StrcQ8VIM6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
StrcQ8VIM6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC25■■□□□ 1.59
StrcQ8VIM6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC25■■□□□ 1.59
StrcQ8VIM6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms