Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retreg1dQ8VE91 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retreg1dQ8VE91 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.15■□□□□ 0.82
Retreg1dQ8VE91 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retreg1dQ8VE91 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.15■□□□□ 0.82
Retreg1dQ8VE91 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
Retreg1dQ8VE91 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retreg1dQ8VE91 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Retreg1dQ8VE91 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retreg1dQ8VE91 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Retreg1dQ8VE91 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retreg1dQ8VE91 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retreg1dQ8VE91 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retreg1dQ8VE91 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.14■□□□□ 0.81
Retreg1dQ8VE91 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.14■□□□□ 0.81
Retreg1dQ8VE91 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.14■□□□□ 0.81
Retreg1dQ8VE91 Golgb1-201ENSMUST00000023534 498 ntBASIC20.14■□□□□ 0.81
Retreg1dQ8VE91 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retreg1dQ8VE91 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retreg1dQ8VE91 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retreg1dQ8VE91 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retreg1dQ8VE91 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg1dQ8VE91 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg1dQ8VE91 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Retreg1dQ8VE91 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg1dQ8VE91 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Retreg1dQ8VE91 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.13■□□□□ 0.81
Retreg1dQ8VE91 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.13■□□□□ 0.81
Retreg1dQ8VE91 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg1dQ8VE91 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg1dQ8VE91 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg1dQ8VE91 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.12■□□□□ 0.81
Retreg1dQ8VE91 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg1dQ8VE91 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg1dQ8VE91 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg1dQ8VE91 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg1dQ8VE91 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg1dQ8VE91 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.11■□□□□ 0.81
Retreg1dQ8VE91 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg1dQ8VE91 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg1dQ8VE91 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.1■□□□□ 0.81
Retreg1dQ8VE91 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retreg1dQ8VE91 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.1■□□□□ 0.81
Retreg1dQ8VE91 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.1■□□□□ 0.81
Retreg1dQ8VE91 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retreg1dQ8VE91 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.1■□□□□ 0.81
Retreg1dQ8VE91 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retreg1dQ8VE91 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retreg1dQ8VE91 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
Retreg1dQ8VE91 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retreg1dQ8VE91 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retreg1dQ8VE91 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retreg1dQ8VE91 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.09■□□□□ 0.81
Retreg1dQ8VE91 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retreg1dQ8VE91 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Retreg1dQ8VE91 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Retreg1dQ8VE91 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Retreg1dQ8VE91 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Retreg1dQ8VE91 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Retreg1dQ8VE91 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.08■□□□□ 0.81
Retreg1dQ8VE91 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retreg1dQ8VE91 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retreg1dQ8VE91 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retreg1dQ8VE91 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.07■□□□□ 0.8
Retreg1dQ8VE91 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.07■□□□□ 0.8
Retreg1dQ8VE91 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retreg1dQ8VE91 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retreg1dQ8VE91 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retreg1dQ8VE91 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Retreg1dQ8VE91 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retreg1dQ8VE91 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retreg1dQ8VE91 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.06■□□□□ 0.8
Retreg1dQ8VE91 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Retreg1dQ8VE91 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retreg1dQ8VE91 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retreg1dQ8VE91 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.05■□□□□ 0.8
Retreg1dQ8VE91 Gm9870-201ENSMUST00000063874 645 ntBASIC20.05■□□□□ 0.8
Retreg1dQ8VE91 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Retreg1dQ8VE91 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retreg1dQ8VE91 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
Retreg1dQ8VE91 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Retreg1dQ8VE91 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retreg1dQ8VE91 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Retreg1dQ8VE91 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retreg1dQ8VE91 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retreg1dQ8VE91 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Retreg1dQ8VE91 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.04■□□□□ 0.8
Retreg1dQ8VE91 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retreg1dQ8VE91 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retreg1dQ8VE91 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Retreg1dQ8VE91 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retreg1dQ8VE91 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retreg1dQ8VE91 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retreg1dQ8VE91 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Retreg1dQ8VE91 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Retreg1dQ8VE91 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retreg1dQ8VE91 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retreg1dQ8VE91 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retreg1dQ8VE91 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Retreg1dQ8VE91 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms