Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Nkd2Q8VE28 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkd2Q8VE28 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkd2Q8VE28 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.54■□□□□ 0.56
Nkd2Q8VE28 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkd2Q8VE28 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkd2Q8VE28 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkd2Q8VE28 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nkd2Q8VE28 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkd2Q8VE28 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkd2Q8VE28 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkd2Q8VE28 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Nkd2Q8VE28 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkd2Q8VE28 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkd2Q8VE28 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkd2Q8VE28 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkd2Q8VE28 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkd2Q8VE28 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nkd2Q8VE28 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.52■□□□□ 0.56
Nkd2Q8VE28 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.52■□□□□ 0.56
Nkd2Q8VE28 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkd2Q8VE28 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Nkd2Q8VE28 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
Nkd2Q8VE28 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nkd2Q8VE28 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Nkd2Q8VE28 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkd2Q8VE28 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkd2Q8VE28 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkd2Q8VE28 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkd2Q8VE28 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkd2Q8VE28 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
Nkd2Q8VE28 Gm12821-201ENSMUST00000120022 600 ntBASIC18.51■□□□□ 0.55
Nkd2Q8VE28 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.51■□□□□ 0.55
Nkd2Q8VE28 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.51■□□□□ 0.55
Nkd2Q8VE28 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.51■□□□□ 0.55
Nkd2Q8VE28 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nkd2Q8VE28 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkd2Q8VE28 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.51■□□□□ 0.55
Nkd2Q8VE28 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkd2Q8VE28 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkd2Q8VE28 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nkd2Q8VE28 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkd2Q8VE28 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.5■□□□□ 0.55
Nkd2Q8VE28 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkd2Q8VE28 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Nkd2Q8VE28 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nkd2Q8VE28 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nkd2Q8VE28 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.5■□□□□ 0.55
Nkd2Q8VE28 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkd2Q8VE28 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkd2Q8VE28 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.5■□□□□ 0.55
Nkd2Q8VE28 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkd2Q8VE28 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkd2Q8VE28 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkd2Q8VE28 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkd2Q8VE28 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkd2Q8VE28 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Nkd2Q8VE28 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
Nkd2Q8VE28 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.49■□□□□ 0.55
Nkd2Q8VE28 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Nkd2Q8VE28 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkd2Q8VE28 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkd2Q8VE28 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkd2Q8VE28 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkd2Q8VE28 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkd2Q8VE28 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Nkd2Q8VE28 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Nkd2Q8VE28 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkd2Q8VE28 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkd2Q8VE28 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Nkd2Q8VE28 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkd2Q8VE28 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Nkd2Q8VE28 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkd2Q8VE28 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.47■□□□□ 0.55
Nkd2Q8VE28 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.47■□□□□ 0.55
Nkd2Q8VE28 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkd2Q8VE28 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkd2Q8VE28 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkd2Q8VE28 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.47■□□□□ 0.55
Nkd2Q8VE28 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Nkd2Q8VE28 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkd2Q8VE28 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Nkd2Q8VE28 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkd2Q8VE28 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkd2Q8VE28 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nkd2Q8VE28 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nkd2Q8VE28 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nkd2Q8VE28 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.46■□□□□ 0.55
Nkd2Q8VE28 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nkd2Q8VE28 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkd2Q8VE28 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkd2Q8VE28 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkd2Q8VE28 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkd2Q8VE28 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nkd2Q8VE28 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkd2Q8VE28 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkd2Q8VE28 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.45■□□□□ 0.54
Nkd2Q8VE28 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkd2Q8VE28 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkd2Q8VE28 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms