Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Nudcd3Q8R1N4 Iqck-206ENSMUST00000208658 2891 ntBASIC20.4■□□□□ 0.86
Nudcd3Q8R1N4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nudcd3Q8R1N4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Nudcd3Q8R1N4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.39■□□□□ 0.86
Nudcd3Q8R1N4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Nudcd3Q8R1N4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nudcd3Q8R1N4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Nudcd3Q8R1N4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nudcd3Q8R1N4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nudcd3Q8R1N4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.39■□□□□ 0.85
Nudcd3Q8R1N4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nudcd3Q8R1N4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nudcd3Q8R1N4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nudcd3Q8R1N4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nudcd3Q8R1N4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Nudcd3Q8R1N4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nudcd3Q8R1N4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nudcd3Q8R1N4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nudcd3Q8R1N4 Golph3-202ENSMUST00000226517 2359 ntBASIC20.38■□□□□ 0.85
Nudcd3Q8R1N4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.38■□□□□ 0.85
Nudcd3Q8R1N4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nudcd3Q8R1N4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Nudcd3Q8R1N4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nudcd3Q8R1N4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Nudcd3Q8R1N4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nudcd3Q8R1N4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Nudcd3Q8R1N4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Nudcd3Q8R1N4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nudcd3Q8R1N4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.36■□□□□ 0.85
Nudcd3Q8R1N4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.36■□□□□ 0.85
Nudcd3Q8R1N4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nudcd3Q8R1N4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nudcd3Q8R1N4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Nudcd3Q8R1N4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nudcd3Q8R1N4 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.36■□□□□ 0.85
Nudcd3Q8R1N4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nudcd3Q8R1N4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Nudcd3Q8R1N4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nudcd3Q8R1N4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.35■□□□□ 0.85
Nudcd3Q8R1N4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nudcd3Q8R1N4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.35■□□□□ 0.85
Nudcd3Q8R1N4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nudcd3Q8R1N4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nudcd3Q8R1N4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nudcd3Q8R1N4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nudcd3Q8R1N4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nudcd3Q8R1N4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nudcd3Q8R1N4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Nudcd3Q8R1N4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nudcd3Q8R1N4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Nudcd3Q8R1N4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nudcd3Q8R1N4 Gm27502-201ENSMUST00000183495 199 ntBASIC20.34■□□□□ 0.85
Nudcd3Q8R1N4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.34■□□□□ 0.85
Nudcd3Q8R1N4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Nudcd3Q8R1N4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.34■□□□□ 0.85
Nudcd3Q8R1N4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nudcd3Q8R1N4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nudcd3Q8R1N4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Nudcd3Q8R1N4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nudcd3Q8R1N4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nudcd3Q8R1N4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nudcd3Q8R1N4 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.33■□□□□ 0.85
Nudcd3Q8R1N4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Nudcd3Q8R1N4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nudcd3Q8R1N4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.84
Nudcd3Q8R1N4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nudcd3Q8R1N4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.32■□□□□ 0.84
Nudcd3Q8R1N4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nudcd3Q8R1N4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Nudcd3Q8R1N4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nudcd3Q8R1N4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nudcd3Q8R1N4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.32■□□□□ 0.84
Nudcd3Q8R1N4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nudcd3Q8R1N4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nudcd3Q8R1N4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nudcd3Q8R1N4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nudcd3Q8R1N4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nudcd3Q8R1N4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nudcd3Q8R1N4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nudcd3Q8R1N4 Gm14523-201ENSMUST00000117260 558 ntBASIC20.31■□□□□ 0.84
Nudcd3Q8R1N4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nudcd3Q8R1N4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nudcd3Q8R1N4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nudcd3Q8R1N4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nudcd3Q8R1N4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nudcd3Q8R1N4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nudcd3Q8R1N4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nudcd3Q8R1N4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nudcd3Q8R1N4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nudcd3Q8R1N4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nudcd3Q8R1N4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nudcd3Q8R1N4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nudcd3Q8R1N4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nudcd3Q8R1N4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Nudcd3Q8R1N4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nudcd3Q8R1N4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nudcd3Q8R1N4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nudcd3Q8R1N4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nudcd3Q8R1N4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms