Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb7Q8CDY9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.42■□□□□ 0.86
Pcdhb7Q8CDY9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb7Q8CDY9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb7Q8CDY9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhb7Q8CDY9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb7Q8CDY9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb7Q8CDY9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Pcdhb7Q8CDY9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb7Q8CDY9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.41■□□□□ 0.86
Pcdhb7Q8CDY9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.41■□□□□ 0.86
Pcdhb7Q8CDY9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb7Q8CDY9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb7Q8CDY9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb7Q8CDY9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb7Q8CDY9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Pcdhb7Q8CDY9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb7Q8CDY9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb7Q8CDY9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb7Q8CDY9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Pcdhb7Q8CDY9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb7Q8CDY9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb7Q8CDY9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb7Q8CDY9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.4■□□□□ 0.86
Pcdhb7Q8CDY9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb7Q8CDY9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.4■□□□□ 0.86
Pcdhb7Q8CDY9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb7Q8CDY9 Gm10399-202ENSMUST00000202768 748 ntBASIC20.4■□□□□ 0.86
Pcdhb7Q8CDY9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.4■□□□□ 0.86
Pcdhb7Q8CDY9 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.4■□□□□ 0.86
Pcdhb7Q8CDY9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb7Q8CDY9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb7Q8CDY9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb7Q8CDY9 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.4■□□□□ 0.86
Pcdhb7Q8CDY9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb7Q8CDY9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhb7Q8CDY9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Pcdhb7Q8CDY9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.39■□□□□ 0.86
Pcdhb7Q8CDY9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb7Q8CDY9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb7Q8CDY9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb7Q8CDY9 Gm15820-201ENSMUST00000201566 728 ntBASIC20.39■□□□□ 0.85
Pcdhb7Q8CDY9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb7Q8CDY9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Pcdhb7Q8CDY9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb7Q8CDY9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb7Q8CDY9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb7Q8CDY9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb7Q8CDY9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb7Q8CDY9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb7Q8CDY9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb7Q8CDY9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Pcdhb7Q8CDY9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.38■□□□□ 0.85
Pcdhb7Q8CDY9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb7Q8CDY9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb7Q8CDY9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb7Q8CDY9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb7Q8CDY9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb7Q8CDY9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb7Q8CDY9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb7Q8CDY9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhb7Q8CDY9 Gm5812-201ENSMUST00000061073 957 ntBASIC20.37■□□□□ 0.85
Pcdhb7Q8CDY9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb7Q8CDY9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb7Q8CDY9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb7Q8CDY9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb7Q8CDY9 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.36■□□□□ 0.85
Pcdhb7Q8CDY9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb7Q8CDY9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb7Q8CDY9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb7Q8CDY9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Pcdhb7Q8CDY9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb7Q8CDY9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb7Q8CDY9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb7Q8CDY9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb7Q8CDY9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb7Q8CDY9 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.35■□□□□ 0.85
Pcdhb7Q8CDY9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb7Q8CDY9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb7Q8CDY9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Pcdhb7Q8CDY9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb7Q8CDY9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb7Q8CDY9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb7Q8CDY9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb7Q8CDY9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb7Q8CDY9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
Pcdhb7Q8CDY9 Gm15546-201ENSMUST00000122095 826 ntBASIC20.33■□□□□ 0.85
Pcdhb7Q8CDY9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.33■□□□□ 0.85
Pcdhb7Q8CDY9 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.33■□□□□ 0.85
Pcdhb7Q8CDY9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb7Q8CDY9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.33■□□□□ 0.84
Pcdhb7Q8CDY9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb7Q8CDY9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb7Q8CDY9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb7Q8CDY9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb7Q8CDY9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.32■□□□□ 0.84
Pcdhb7Q8CDY9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb7Q8CDY9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Pcdhb7Q8CDY9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Pcdhb7Q8CDY9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms