Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC26.14■■□□□ 1.78
Ccdc60Q8C4J0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Ccdc60Q8C4J0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Ccdc60Q8C4J0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC26.14■■□□□ 1.77
Ccdc60Q8C4J0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ccdc60Q8C4J0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ccdc60Q8C4J0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC26.13■■□□□ 1.77
Ccdc60Q8C4J0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ccdc60Q8C4J0 Gm38160-201ENSMUST00000193090 2499 ntBASIC26.12■■□□□ 1.77
Ccdc60Q8C4J0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Ccdc60Q8C4J0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ccdc60Q8C4J0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ccdc60Q8C4J0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC26.11■■□□□ 1.77
Ccdc60Q8C4J0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ccdc60Q8C4J0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ccdc60Q8C4J0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Ccdc60Q8C4J0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC26.11■■□□□ 1.77
Ccdc60Q8C4J0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC26.11■■□□□ 1.77
Ccdc60Q8C4J0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ccdc60Q8C4J0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ccdc60Q8C4J0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC26.1■■□□□ 1.77
Ccdc60Q8C4J0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Ccdc60Q8C4J0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Ccdc60Q8C4J0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ccdc60Q8C4J0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Ccdc60Q8C4J0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ccdc60Q8C4J0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ccdc60Q8C4J0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ccdc60Q8C4J0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Ccdc60Q8C4J0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ccdc60Q8C4J0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ccdc60Q8C4J0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ccdc60Q8C4J0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ccdc60Q8C4J0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC26.08■■□□□ 1.76
Ccdc60Q8C4J0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC26.08■■□□□ 1.76
Ccdc60Q8C4J0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
Ccdc60Q8C4J0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ccdc60Q8C4J0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
Ccdc60Q8C4J0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ccdc60Q8C4J0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Ccdc60Q8C4J0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ccdc60Q8C4J0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ccdc60Q8C4J0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Ccdc60Q8C4J0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Ccdc60Q8C4J0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ccdc60Q8C4J0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC26.05■■□□□ 1.76
Ccdc60Q8C4J0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Ccdc60Q8C4J0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC26.05■■□□□ 1.76
Ccdc60Q8C4J0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Ccdc60Q8C4J0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ccdc60Q8C4J0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC26.04■■□□□ 1.76
Ccdc60Q8C4J0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC26.04■■□□□ 1.76
Ccdc60Q8C4J0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ccdc60Q8C4J0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ccdc60Q8C4J0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ccdc60Q8C4J0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Ccdc60Q8C4J0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Ccdc60Q8C4J0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Ccdc60Q8C4J0 Gm10657-201ENSMUST00000193528 1031 ntBASIC26.03■■□□□ 1.76
Ccdc60Q8C4J0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ccdc60Q8C4J0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC26.03■■□□□ 1.76
Ccdc60Q8C4J0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ccdc60Q8C4J0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Ccdc60Q8C4J0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ccdc60Q8C4J0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ccdc60Q8C4J0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
Ccdc60Q8C4J0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC26.02■■□□□ 1.76
Ccdc60Q8C4J0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Ccdc60Q8C4J0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ccdc60Q8C4J0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Ccdc60Q8C4J0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ccdc60Q8C4J0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Ccdc60Q8C4J0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ccdc60Q8C4J0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ccdc60Q8C4J0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Ccdc60Q8C4J0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
Ccdc60Q8C4J0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Ccdc60Q8C4J0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Ccdc60Q8C4J0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC26.01■■□□□ 1.75
Ccdc60Q8C4J0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Ccdc60Q8C4J0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
Ccdc60Q8C4J0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ccdc60Q8C4J0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC26■■□□□ 1.75
Ccdc60Q8C4J0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ccdc60Q8C4J0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC26■■□□□ 1.75
Ccdc60Q8C4J0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ccdc60Q8C4J0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC26■■□□□ 1.75
Ccdc60Q8C4J0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC26■■□□□ 1.75
Ccdc60Q8C4J0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC26■■□□□ 1.75
Ccdc60Q8C4J0 Snhg20-203ENSMUST00000182811 2153 ntBASIC26■■□□□ 1.75
Ccdc60Q8C4J0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC25.99■■□□□ 1.75
Ccdc60Q8C4J0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ccdc60Q8C4J0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC25.99■■□□□ 1.75
Ccdc60Q8C4J0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC25.99■■□□□ 1.75
Ccdc60Q8C4J0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Ccdc60Q8C4J0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ccdc60Q8C4J0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Ccdc60Q8C4J0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ccdc60Q8C4J0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ccdc60Q8C4J0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms