Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trub1Q8C0D0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trub1Q8C0D0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trub1Q8C0D0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.14■□□□□ 0.97
Trub1Q8C0D0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trub1Q8C0D0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trub1Q8C0D0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Trub1Q8C0D0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trub1Q8C0D0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trub1Q8C0D0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trub1Q8C0D0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trub1Q8C0D0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trub1Q8C0D0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trub1Q8C0D0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trub1Q8C0D0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trub1Q8C0D0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trub1Q8C0D0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trub1Q8C0D0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trub1Q8C0D0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trub1Q8C0D0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trub1Q8C0D0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trub1Q8C0D0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trub1Q8C0D0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trub1Q8C0D0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Trub1Q8C0D0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Trub1Q8C0D0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trub1Q8C0D0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trub1Q8C0D0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trub1Q8C0D0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trub1Q8C0D0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trub1Q8C0D0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trub1Q8C0D0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Trub1Q8C0D0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trub1Q8C0D0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trub1Q8C0D0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trub1Q8C0D0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Trub1Q8C0D0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trub1Q8C0D0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
Trub1Q8C0D0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trub1Q8C0D0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trub1Q8C0D0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Trub1Q8C0D0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trub1Q8C0D0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trub1Q8C0D0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trub1Q8C0D0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trub1Q8C0D0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trub1Q8C0D0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trub1Q8C0D0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.09■□□□□ 0.97
Trub1Q8C0D0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trub1Q8C0D0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Trub1Q8C0D0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trub1Q8C0D0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Trub1Q8C0D0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trub1Q8C0D0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trub1Q8C0D0 Gm7417-201ENSMUST00000192950 473 ntBASIC21.08■□□□□ 0.97
Trub1Q8C0D0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.08■□□□□ 0.97
Trub1Q8C0D0 Gm7143-201ENSMUST00000222811 859 ntBASIC21.08■□□□□ 0.97
Trub1Q8C0D0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trub1Q8C0D0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Trub1Q8C0D0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
Trub1Q8C0D0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trub1Q8C0D0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trub1Q8C0D0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trub1Q8C0D0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trub1Q8C0D0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trub1Q8C0D0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.07■□□□□ 0.96
Trub1Q8C0D0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Trub1Q8C0D0 Gm9959-201ENSMUST00000068277 390 ntBASIC21.07■□□□□ 0.96
Trub1Q8C0D0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trub1Q8C0D0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Trub1Q8C0D0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trub1Q8C0D0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trub1Q8C0D0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trub1Q8C0D0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Trub1Q8C0D0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.06■□□□□ 0.96
Trub1Q8C0D0 Etf1-202ENSMUST00000180351 108 ntBASIC21.06■□□□□ 0.96
Trub1Q8C0D0 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.06■□□□□ 0.96
Trub1Q8C0D0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trub1Q8C0D0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trub1Q8C0D0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trub1Q8C0D0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trub1Q8C0D0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trub1Q8C0D0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trub1Q8C0D0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Trub1Q8C0D0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.05■□□□□ 0.96
Trub1Q8C0D0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trub1Q8C0D0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trub1Q8C0D0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trub1Q8C0D0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trub1Q8C0D0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Trub1Q8C0D0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Trub1Q8C0D0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trub1Q8C0D0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trub1Q8C0D0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trub1Q8C0D0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trub1Q8C0D0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trub1Q8C0D0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trub1Q8C0D0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Trub1Q8C0D0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trub1Q8C0D0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms