Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.83■□□□□ 0.77
Pcdh20Q8BIZ0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdh20Q8BIZ0 Iqck-206ENSMUST00000208658 2891 ntBASIC19.82■□□□□ 0.76
Pcdh20Q8BIZ0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh20Q8BIZ0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh20Q8BIZ0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh20Q8BIZ0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh20Q8BIZ0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh20Q8BIZ0 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.82■□□□□ 0.76
Pcdh20Q8BIZ0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh20Q8BIZ0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh20Q8BIZ0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh20Q8BIZ0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.81■□□□□ 0.76
Pcdh20Q8BIZ0 Gm9959-201ENSMUST00000068277 390 ntBASIC19.81■□□□□ 0.76
Pcdh20Q8BIZ0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh20Q8BIZ0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh20Q8BIZ0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh20Q8BIZ0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh20Q8BIZ0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh20Q8BIZ0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh20Q8BIZ0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh20Q8BIZ0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdh20Q8BIZ0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh20Q8BIZ0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh20Q8BIZ0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh20Q8BIZ0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh20Q8BIZ0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh20Q8BIZ0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Pcdh20Q8BIZ0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh20Q8BIZ0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh20Q8BIZ0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh20Q8BIZ0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.8■□□□□ 0.76
Pcdh20Q8BIZ0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Pcdh20Q8BIZ0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh20Q8BIZ0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh20Q8BIZ0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Pcdh20Q8BIZ0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh20Q8BIZ0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh20Q8BIZ0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh20Q8BIZ0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh20Q8BIZ0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh20Q8BIZ0 Gm14117-201ENSMUST00000122417 843 ntBASIC19.79■□□□□ 0.76
Pcdh20Q8BIZ0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.79■□□□□ 0.76
Pcdh20Q8BIZ0 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.79■□□□□ 0.76
Pcdh20Q8BIZ0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh20Q8BIZ0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Pcdh20Q8BIZ0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh20Q8BIZ0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh20Q8BIZ0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Pcdh20Q8BIZ0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh20Q8BIZ0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Pcdh20Q8BIZ0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh20Q8BIZ0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Pcdh20Q8BIZ0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh20Q8BIZ0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh20Q8BIZ0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.78■□□□□ 0.76
Pcdh20Q8BIZ0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh20Q8BIZ0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh20Q8BIZ0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.78■□□□□ 0.76
Pcdh20Q8BIZ0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pcdh20Q8BIZ0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh20Q8BIZ0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.78■□□□□ 0.76
Pcdh20Q8BIZ0 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.77■□□□□ 0.76
Pcdh20Q8BIZ0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh20Q8BIZ0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh20Q8BIZ0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Pcdh20Q8BIZ0 Etf1-202ENSMUST00000180351 108 ntBASIC19.77■□□□□ 0.76
Pcdh20Q8BIZ0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Pcdh20Q8BIZ0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Pcdh20Q8BIZ0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Pcdh20Q8BIZ0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh20Q8BIZ0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh20Q8BIZ0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Pcdh20Q8BIZ0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh20Q8BIZ0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.76■□□□□ 0.75
Pcdh20Q8BIZ0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.76■□□□□ 0.75
Pcdh20Q8BIZ0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh20Q8BIZ0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh20Q8BIZ0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh20Q8BIZ0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh20Q8BIZ0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh20Q8BIZ0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Pcdh20Q8BIZ0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh20Q8BIZ0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh20Q8BIZ0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh20Q8BIZ0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh20Q8BIZ0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh20Q8BIZ0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdh20Q8BIZ0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh20Q8BIZ0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh20Q8BIZ0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh20Q8BIZ0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh20Q8BIZ0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Pcdh20Q8BIZ0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh20Q8BIZ0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh20Q8BIZ0 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.74■□□□□ 0.75
Pcdh20Q8BIZ0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Pcdh20Q8BIZ0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh20Q8BIZ0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh20Q8BIZ0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms