Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upk3bQ80YF6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Upk3bQ80YF6 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.25■□□□□ 0.35
Upk3bQ80YF6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Upk3bQ80YF6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upk3bQ80YF6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Upk3bQ80YF6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.25■□□□□ 0.35
Upk3bQ80YF6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upk3bQ80YF6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.25■□□□□ 0.35
Upk3bQ80YF6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Upk3bQ80YF6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upk3bQ80YF6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.24■□□□□ 0.35
Upk3bQ80YF6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Upk3bQ80YF6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upk3bQ80YF6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.24■□□□□ 0.35
Upk3bQ80YF6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Upk3bQ80YF6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Upk3bQ80YF6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upk3bQ80YF6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upk3bQ80YF6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.23■□□□□ 0.35
Upk3bQ80YF6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Upk3bQ80YF6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upk3bQ80YF6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Upk3bQ80YF6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upk3bQ80YF6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upk3bQ80YF6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Upk3bQ80YF6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Upk3bQ80YF6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upk3bQ80YF6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Upk3bQ80YF6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk3bQ80YF6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk3bQ80YF6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk3bQ80YF6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.21■□□□□ 0.35
Upk3bQ80YF6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Upk3bQ80YF6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk3bQ80YF6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk3bQ80YF6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk3bQ80YF6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk3bQ80YF6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk3bQ80YF6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk3bQ80YF6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.2■□□□□ 0.34
Upk3bQ80YF6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk3bQ80YF6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk3bQ80YF6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk3bQ80YF6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk3bQ80YF6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk3bQ80YF6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk3bQ80YF6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Upk3bQ80YF6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk3bQ80YF6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Upk3bQ80YF6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk3bQ80YF6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk3bQ80YF6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk3bQ80YF6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.19■□□□□ 0.34
Upk3bQ80YF6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk3bQ80YF6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.18■□□□□ 0.34
Upk3bQ80YF6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Upk3bQ80YF6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Upk3bQ80YF6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Upk3bQ80YF6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Upk3bQ80YF6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Upk3bQ80YF6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Upk3bQ80YF6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Upk3bQ80YF6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Upk3bQ80YF6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Upk3bQ80YF6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Upk3bQ80YF6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Upk3bQ80YF6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Upk3bQ80YF6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Upk3bQ80YF6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Upk3bQ80YF6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Upk3bQ80YF6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Upk3bQ80YF6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Upk3bQ80YF6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Upk3bQ80YF6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Upk3bQ80YF6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Upk3bQ80YF6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms