Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc28Q80XJ3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc28Q80XJ3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc28Q80XJ3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc28Q80XJ3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ttc28Q80XJ3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc28Q80XJ3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc28Q80XJ3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc28Q80XJ3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ttc28Q80XJ3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc28Q80XJ3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc28Q80XJ3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Ttc28Q80XJ3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ttc28Q80XJ3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.39■□□□□ 0.37
Ttc28Q80XJ3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ttc28Q80XJ3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ttc28Q80XJ3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ttc28Q80XJ3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.39■□□□□ 0.37
Ttc28Q80XJ3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ttc28Q80XJ3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ttc28Q80XJ3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ttc28Q80XJ3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ttc28Q80XJ3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ttc28Q80XJ3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ttc28Q80XJ3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ttc28Q80XJ3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.38■□□□□ 0.37
Ttc28Q80XJ3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ttc28Q80XJ3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ttc28Q80XJ3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ttc28Q80XJ3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.37■□□□□ 0.37
Ttc28Q80XJ3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.37■□□□□ 0.37
Ttc28Q80XJ3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ttc28Q80XJ3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ttc28Q80XJ3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ttc28Q80XJ3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ttc28Q80XJ3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ttc28Q80XJ3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ttc28Q80XJ3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ttc28Q80XJ3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ttc28Q80XJ3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ttc28Q80XJ3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ttc28Q80XJ3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ttc28Q80XJ3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ttc28Q80XJ3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ttc28Q80XJ3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ttc28Q80XJ3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ttc28Q80XJ3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ttc28Q80XJ3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ttc28Q80XJ3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc28Q80XJ3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc28Q80XJ3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.35■□□□□ 0.37
Ttc28Q80XJ3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc28Q80XJ3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc28Q80XJ3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc28Q80XJ3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ttc28Q80XJ3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.34■□□□□ 0.37
Ttc28Q80XJ3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ttc28Q80XJ3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ttc28Q80XJ3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.34■□□□□ 0.37
Ttc28Q80XJ3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.33■□□□□ 0.37
Ttc28Q80XJ3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.33■□□□□ 0.37
Ttc28Q80XJ3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Ttc28Q80XJ3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ttc28Q80XJ3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ttc28Q80XJ3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ttc28Q80XJ3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ttc28Q80XJ3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ttc28Q80XJ3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Ttc28Q80XJ3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ttc28Q80XJ3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.33■□□□□ 0.36
Ttc28Q80XJ3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ttc28Q80XJ3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ttc28Q80XJ3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc28Q80XJ3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc28Q80XJ3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc28Q80XJ3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc28Q80XJ3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc28Q80XJ3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.32■□□□□ 0.36
Ttc28Q80XJ3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Ttc28Q80XJ3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.32■□□□□ 0.36
Ttc28Q80XJ3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc28Q80XJ3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.32■□□□□ 0.36
Ttc28Q80XJ3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc28Q80XJ3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc28Q80XJ3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc28Q80XJ3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc28Q80XJ3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc28Q80XJ3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ttc28Q80XJ3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.31■□□□□ 0.36
Ttc28Q80XJ3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc28Q80XJ3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.31■□□□□ 0.36
Ttc28Q80XJ3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.31■□□□□ 0.36
Ttc28Q80XJ3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc28Q80XJ3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc28Q80XJ3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc28Q80XJ3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc28Q80XJ3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc28Q80XJ3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.3■□□□□ 0.36
Ttc28Q80XJ3 Gm42778-201ENSMUST00000199644 553 ntBASIC17.3■□□□□ 0.36
Ttc28Q80XJ3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms