Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vrk1Q80X41 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vrk1Q80X41 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vrk1Q80X41 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.52■□□□□ 0.72
Vrk1Q80X41 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Vrk1Q80X41 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vrk1Q80X41 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.52■□□□□ 0.72
Vrk1Q80X41 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vrk1Q80X41 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.52■□□□□ 0.72
Vrk1Q80X41 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Vrk1Q80X41 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vrk1Q80X41 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vrk1Q80X41 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vrk1Q80X41 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vrk1Q80X41 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Vrk1Q80X41 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vrk1Q80X41 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Vrk1Q80X41 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.51■□□□□ 0.71
Vrk1Q80X41 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vrk1Q80X41 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vrk1Q80X41 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Vrk1Q80X41 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Vrk1Q80X41 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vrk1Q80X41 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.51■□□□□ 0.71
Vrk1Q80X41 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.51■□□□□ 0.71
Vrk1Q80X41 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vrk1Q80X41 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vrk1Q80X41 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Vrk1Q80X41 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vrk1Q80X41 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Vrk1Q80X41 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vrk1Q80X41 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.49■□□□□ 0.71
Vrk1Q80X41 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vrk1Q80X41 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
Vrk1Q80X41 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vrk1Q80X41 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vrk1Q80X41 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.48■□□□□ 0.71
Vrk1Q80X41 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vrk1Q80X41 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vrk1Q80X41 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.48■□□□□ 0.71
Vrk1Q80X41 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Vrk1Q80X41 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vrk1Q80X41 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vrk1Q80X41 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vrk1Q80X41 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vrk1Q80X41 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vrk1Q80X41 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vrk1Q80X41 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vrk1Q80X41 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vrk1Q80X41 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vrk1Q80X41 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vrk1Q80X41 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vrk1Q80X41 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vrk1Q80X41 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vrk1Q80X41 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vrk1Q80X41 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vrk1Q80X41 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vrk1Q80X41 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Vrk1Q80X41 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Vrk1Q80X41 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.46■□□□□ 0.71
Vrk1Q80X41 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Vrk1Q80X41 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vrk1Q80X41 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vrk1Q80X41 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.45■□□□□ 0.7
Vrk1Q80X41 Gm43173-201ENSMUST00000202246 593 ntBASIC19.45■□□□□ 0.7
Vrk1Q80X41 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vrk1Q80X41 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vrk1Q80X41 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vrk1Q80X41 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
Vrk1Q80X41 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vrk1Q80X41 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.44■□□□□ 0.7
Vrk1Q80X41 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vrk1Q80X41 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vrk1Q80X41 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vrk1Q80X41 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.44■□□□□ 0.7
Vrk1Q80X41 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.44■□□□□ 0.7
Vrk1Q80X41 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vrk1Q80X41 Gm43530-201ENSMUST00000195920 274 ntBASIC19.44■□□□□ 0.7
Vrk1Q80X41 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vrk1Q80X41 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vrk1Q80X41 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vrk1Q80X41 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Vrk1Q80X41 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vrk1Q80X41 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vrk1Q80X41 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vrk1Q80X41 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vrk1Q80X41 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vrk1Q80X41 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.43■□□□□ 0.7
Vrk1Q80X41 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vrk1Q80X41 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vrk1Q80X41 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.43■□□□□ 0.7
Vrk1Q80X41 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vrk1Q80X41 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vrk1Q80X41 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vrk1Q80X41 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vrk1Q80X41 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vrk1Q80X41 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vrk1Q80X41 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vrk1Q80X41 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vrk1Q80X41 Gm12251-201ENSMUST00000117893 792 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms