Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Trim36Q80WG7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim36Q80WG7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim36Q80WG7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim36Q80WG7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim36Q80WG7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.6■□□□□ 0.73
Trim36Q80WG7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim36Q80WG7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Trim36Q80WG7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim36Q80WG7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Trim36Q80WG7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim36Q80WG7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim36Q80WG7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim36Q80WG7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trim36Q80WG7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.59■□□□□ 0.73
Trim36Q80WG7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim36Q80WG7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.59■□□□□ 0.73
Trim36Q80WG7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim36Q80WG7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim36Q80WG7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trim36Q80WG7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim36Q80WG7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Trim36Q80WG7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.58■□□□□ 0.72
Trim36Q80WG7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.58■□□□□ 0.72
Trim36Q80WG7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim36Q80WG7 Gm10232-201ENSMUST00000089221 720 ntBASIC19.58■□□□□ 0.72
Trim36Q80WG7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim36Q80WG7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim36Q80WG7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim36Q80WG7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim36Q80WG7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim36Q80WG7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.57■□□□□ 0.72
Trim36Q80WG7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim36Q80WG7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim36Q80WG7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim36Q80WG7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim36Q80WG7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim36Q80WG7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim36Q80WG7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Trim36Q80WG7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim36Q80WG7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Trim36Q80WG7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim36Q80WG7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim36Q80WG7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim36Q80WG7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim36Q80WG7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim36Q80WG7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim36Q80WG7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim36Q80WG7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim36Q80WG7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim36Q80WG7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim36Q80WG7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trim36Q80WG7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Trim36Q80WG7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim36Q80WG7 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.56■□□□□ 0.72
Trim36Q80WG7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim36Q80WG7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Trim36Q80WG7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim36Q80WG7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim36Q80WG7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim36Q80WG7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Trim36Q80WG7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim36Q80WG7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim36Q80WG7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Trim36Q80WG7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Trim36Q80WG7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Trim36Q80WG7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Trim36Q80WG7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.54■□□□□ 0.72
Trim36Q80WG7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim36Q80WG7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim36Q80WG7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Trim36Q80WG7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim36Q80WG7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim36Q80WG7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim36Q80WG7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim36Q80WG7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim36Q80WG7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Trim36Q80WG7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim36Q80WG7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim36Q80WG7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim36Q80WG7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim36Q80WG7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim36Q80WG7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim36Q80WG7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim36Q80WG7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim36Q80WG7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Trim36Q80WG7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Trim36Q80WG7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Trim36Q80WG7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim36Q80WG7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim36Q80WG7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim36Q80WG7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim36Q80WG7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim36Q80WG7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim36Q80WG7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim36Q80WG7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim36Q80WG7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.5■□□□□ 0.71
Trim36Q80WG7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trim36Q80WG7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.5■□□□□ 0.71
Trim36Q80WG7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms