Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Kdm1aQ6ZQ88 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Kdm1aQ6ZQ88 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Kdm1aQ6ZQ88 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.63■■□□□ 1.21
Kdm1aQ6ZQ88 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Kdm1aQ6ZQ88 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
Kdm1aQ6ZQ88 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Kdm1aQ6ZQ88 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Kdm1aQ6ZQ88 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.62■■□□□ 1.21
Kdm1aQ6ZQ88 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
Kdm1aQ6ZQ88 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Kdm1aQ6ZQ88 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Kdm1aQ6ZQ88 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
Kdm1aQ6ZQ88 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Kdm1aQ6ZQ88 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Kdm1aQ6ZQ88 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.61■■□□□ 1.21
Kdm1aQ6ZQ88 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC22.61■■□□□ 1.21
Kdm1aQ6ZQ88 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Kdm1aQ6ZQ88 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Kdm1aQ6ZQ88 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm1aQ6ZQ88 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm1aQ6ZQ88 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Kdm1aQ6ZQ88 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Kdm1aQ6ZQ88 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Kdm1aQ6ZQ88 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm1aQ6ZQ88 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm1aQ6ZQ88 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm1aQ6ZQ88 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm1aQ6ZQ88 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Kdm1aQ6ZQ88 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Kdm1aQ6ZQ88 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Kdm1aQ6ZQ88 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Kdm1aQ6ZQ88 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Kdm1aQ6ZQ88 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Kdm1aQ6ZQ88 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Kdm1aQ6ZQ88 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Kdm1aQ6ZQ88 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Kdm1aQ6ZQ88 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Kdm1aQ6ZQ88 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Kdm1aQ6ZQ88 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Kdm1aQ6ZQ88 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Kdm1aQ6ZQ88 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Kdm1aQ6ZQ88 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.58■■□□□ 1.21
Kdm1aQ6ZQ88 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Kdm1aQ6ZQ88 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Kdm1aQ6ZQ88 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
Kdm1aQ6ZQ88 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Kdm1aQ6ZQ88 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.57■■□□□ 1.2
Kdm1aQ6ZQ88 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Kdm1aQ6ZQ88 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Kdm1aQ6ZQ88 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Kdm1aQ6ZQ88 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
Kdm1aQ6ZQ88 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Kdm1aQ6ZQ88 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Kdm1aQ6ZQ88 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Kdm1aQ6ZQ88 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Kdm1aQ6ZQ88 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Kdm1aQ6ZQ88 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.55■■□□□ 1.2
Kdm1aQ6ZQ88 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Kdm1aQ6ZQ88 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Kdm1aQ6ZQ88 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Kdm1aQ6ZQ88 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Kdm1aQ6ZQ88 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Kdm1aQ6ZQ88 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Kdm1aQ6ZQ88 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.54■■□□□ 1.2
Kdm1aQ6ZQ88 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Kdm1aQ6ZQ88 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Kdm1aQ6ZQ88 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Kdm1aQ6ZQ88 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.53■■□□□ 1.2
Kdm1aQ6ZQ88 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Kdm1aQ6ZQ88 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC22.53■■□□□ 1.2
Kdm1aQ6ZQ88 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Kdm1aQ6ZQ88 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Kdm1aQ6ZQ88 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Kdm1aQ6ZQ88 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC22.52■■□□□ 1.2
Kdm1aQ6ZQ88 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Kdm1aQ6ZQ88 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.52■■□□□ 1.2
Kdm1aQ6ZQ88 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Kdm1aQ6ZQ88 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Kdm1aQ6ZQ88 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Kdm1aQ6ZQ88 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Kdm1aQ6ZQ88 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Kdm1aQ6ZQ88 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.51■■□□□ 1.19
Kdm1aQ6ZQ88 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.51■■□□□ 1.19
Kdm1aQ6ZQ88 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Kdm1aQ6ZQ88 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Kdm1aQ6ZQ88 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Kdm1aQ6ZQ88 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
Kdm1aQ6ZQ88 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Kdm1aQ6ZQ88 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Kdm1aQ6ZQ88 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kdm1aQ6ZQ88 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kdm1aQ6ZQ88 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kdm1aQ6ZQ88 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kdm1aQ6ZQ88 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kdm1aQ6ZQ88 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.5■■□□□ 1.19
Kdm1aQ6ZQ88 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.5■■□□□ 1.19
Kdm1aQ6ZQ88 AC152827.1-201ENSMUST00000221143 2189 ntBASIC22.5■■□□□ 1.19
Kdm1aQ6ZQ88 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kdm1aQ6ZQ88 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms