Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Npc1l1Q6T3U4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Npc1l1Q6T3U4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Npc1l1Q6T3U4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC24.68■■□□□ 1.54
Npc1l1Q6T3U4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Npc1l1Q6T3U4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Npc1l1Q6T3U4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Npc1l1Q6T3U4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC24.67■■□□□ 1.54
Npc1l1Q6T3U4 Slc35b2-207ENSMUST00000226086 850 ntBASIC24.66■■□□□ 1.54
Npc1l1Q6T3U4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC24.66■■□□□ 1.54
Npc1l1Q6T3U4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Npc1l1Q6T3U4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Npc1l1Q6T3U4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Npc1l1Q6T3U4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC24.66■■□□□ 1.54
Npc1l1Q6T3U4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Npc1l1Q6T3U4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Npc1l1Q6T3U4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC24.64■■□□□ 1.54
Npc1l1Q6T3U4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Npc1l1Q6T3U4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
Npc1l1Q6T3U4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Npc1l1Q6T3U4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Npc1l1Q6T3U4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Npc1l1Q6T3U4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Npc1l1Q6T3U4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Npc1l1Q6T3U4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Npc1l1Q6T3U4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC24.63■■□□□ 1.53
Npc1l1Q6T3U4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Npc1l1Q6T3U4 Gm6139-201ENSMUST00000079261 882 ntBASIC24.63■■□□□ 1.53
Npc1l1Q6T3U4 Gm12504-201ENSMUST00000120860 2231 ntBASIC24.63■■□□□ 1.53
Npc1l1Q6T3U4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC24.63■■□□□ 1.53
Npc1l1Q6T3U4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.63■■□□□ 1.53
Npc1l1Q6T3U4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.63■■□□□ 1.53
Npc1l1Q6T3U4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Npc1l1Q6T3U4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Npc1l1Q6T3U4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Npc1l1Q6T3U4 Gm2011-201ENSMUST00000203124 1263 ntBASIC24.62■■□□□ 1.53
Npc1l1Q6T3U4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Npc1l1Q6T3U4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC24.62■■□□□ 1.53
Npc1l1Q6T3U4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Npc1l1Q6T3U4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
Npc1l1Q6T3U4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Npc1l1Q6T3U4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
Npc1l1Q6T3U4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Npc1l1Q6T3U4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Npc1l1Q6T3U4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Npc1l1Q6T3U4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
Npc1l1Q6T3U4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Npc1l1Q6T3U4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC24.61■■□□□ 1.53
Npc1l1Q6T3U4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Npc1l1Q6T3U4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Npc1l1Q6T3U4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Npc1l1Q6T3U4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Npc1l1Q6T3U4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Npc1l1Q6T3U4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Npc1l1Q6T3U4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
Npc1l1Q6T3U4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC24.6■■□□□ 1.53
Npc1l1Q6T3U4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
Npc1l1Q6T3U4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Npc1l1Q6T3U4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Npc1l1Q6T3U4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Npc1l1Q6T3U4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Npc1l1Q6T3U4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Npc1l1Q6T3U4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Npc1l1Q6T3U4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC24.59■■□□□ 1.53
Npc1l1Q6T3U4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Npc1l1Q6T3U4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC24.59■■□□□ 1.53
Npc1l1Q6T3U4 Gm8495-201ENSMUST00000188740 694 ntBASIC24.59■■□□□ 1.53
Npc1l1Q6T3U4 Gm43137-201ENSMUST00000198052 594 ntBASIC24.59■■□□□ 1.53
Npc1l1Q6T3U4 Gm5297-201ENSMUST00000198555 1171 ntBASIC24.59■■□□□ 1.53
Npc1l1Q6T3U4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Npc1l1Q6T3U4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Npc1l1Q6T3U4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Npc1l1Q6T3U4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Npc1l1Q6T3U4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Npc1l1Q6T3U4 Gm8770-201ENSMUST00000121113 1109 ntBASIC24.58■■□□□ 1.52
Npc1l1Q6T3U4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
Npc1l1Q6T3U4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC24.57■■□□□ 1.52
Npc1l1Q6T3U4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Npc1l1Q6T3U4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Npc1l1Q6T3U4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC24.57■■□□□ 1.52
Npc1l1Q6T3U4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Npc1l1Q6T3U4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Npc1l1Q6T3U4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Npc1l1Q6T3U4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Npc1l1Q6T3U4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC24.56■■□□□ 1.52
Npc1l1Q6T3U4 Gm18284-201ENSMUST00000172604 624 ntBASIC24.56■■□□□ 1.52
Npc1l1Q6T3U4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
Npc1l1Q6T3U4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Npc1l1Q6T3U4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Npc1l1Q6T3U4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC24.55■■□□□ 1.52
Npc1l1Q6T3U4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Npc1l1Q6T3U4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Npc1l1Q6T3U4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC24.55■■□□□ 1.52
Npc1l1Q6T3U4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Npc1l1Q6T3U4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC24.55■■□□□ 1.52
Npc1l1Q6T3U4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC24.55■■□□□ 1.52
Npc1l1Q6T3U4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Npc1l1Q6T3U4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
Npc1l1Q6T3U4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Npc1l1Q6T3U4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms