Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Snrnp40Q6PE01 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Snrnp40Q6PE01 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snrnp40Q6PE01 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Snrnp40Q6PE01 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Snrnp40Q6PE01 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Snrnp40Q6PE01 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Snrnp40Q6PE01 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snrnp40Q6PE01 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snrnp40Q6PE01 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snrnp40Q6PE01 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Snrnp40Q6PE01 Gm18671-201ENSMUST00000214826 683 ntBASIC18.13■□□□□ 0.49
Snrnp40Q6PE01 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.13■□□□□ 0.49
Snrnp40Q6PE01 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snrnp40Q6PE01 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Snrnp40Q6PE01 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Snrnp40Q6PE01 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Snrnp40Q6PE01 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Snrnp40Q6PE01 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Snrnp40Q6PE01 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Snrnp40Q6PE01 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Snrnp40Q6PE01 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Snrnp40Q6PE01 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Snrnp40Q6PE01 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Snrnp40Q6PE01 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.11■□□□□ 0.49
Snrnp40Q6PE01 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Snrnp40Q6PE01 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Snrnp40Q6PE01 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Snrnp40Q6PE01 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.11■□□□□ 0.49
Snrnp40Q6PE01 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Snrnp40Q6PE01 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Snrnp40Q6PE01 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Snrnp40Q6PE01 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Snrnp40Q6PE01 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Snrnp40Q6PE01 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.1■□□□□ 0.49
Snrnp40Q6PE01 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Snrnp40Q6PE01 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.1■□□□□ 0.49
Snrnp40Q6PE01 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.1■□□□□ 0.49
Snrnp40Q6PE01 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.1■□□□□ 0.49
Snrnp40Q6PE01 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.1■□□□□ 0.49
Snrnp40Q6PE01 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Snrnp40Q6PE01 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Snrnp40Q6PE01 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Snrnp40Q6PE01 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Snrnp40Q6PE01 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snrnp40Q6PE01 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Snrnp40Q6PE01 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.09■□□□□ 0.49
Snrnp40Q6PE01 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snrnp40Q6PE01 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snrnp40Q6PE01 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.09■□□□□ 0.49
Snrnp40Q6PE01 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snrnp40Q6PE01 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Snrnp40Q6PE01 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Snrnp40Q6PE01 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Snrnp40Q6PE01 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Snrnp40Q6PE01 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Snrnp40Q6PE01 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
Snrnp40Q6PE01 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snrnp40Q6PE01 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snrnp40Q6PE01 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snrnp40Q6PE01 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snrnp40Q6PE01 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.08■□□□□ 0.48
Snrnp40Q6PE01 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Snrnp40Q6PE01 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Snrnp40Q6PE01 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.07■□□□□ 0.48
Snrnp40Q6PE01 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.07■□□□□ 0.48
Snrnp40Q6PE01 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snrnp40Q6PE01 Gm27011-201ENSMUST00000182352 972 ntBASIC18.07■□□□□ 0.48
Snrnp40Q6PE01 AV356131-201ENSMUST00000206201 750 ntBASIC18.07■□□□□ 0.48
Snrnp40Q6PE01 Gm10033-202ENSMUST00000211874 928 ntBASIC18.07■□□□□ 0.48
Snrnp40Q6PE01 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snrnp40Q6PE01 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snrnp40Q6PE01 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.07■□□□□ 0.48
Snrnp40Q6PE01 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snrnp40Q6PE01 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snrnp40Q6PE01 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Snrnp40Q6PE01 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snrnp40Q6PE01 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.06■□□□□ 0.48
Snrnp40Q6PE01 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snrnp40Q6PE01 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snrnp40Q6PE01 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snrnp40Q6PE01 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snrnp40Q6PE01 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snrnp40Q6PE01 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snrnp40Q6PE01 Gm42778-201ENSMUST00000199644 553 ntBASIC18.05■□□□□ 0.48
Snrnp40Q6PE01 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snrnp40Q6PE01 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Snrnp40Q6PE01 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snrnp40Q6PE01 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.05■□□□□ 0.48
Snrnp40Q6PE01 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.05■□□□□ 0.48
Snrnp40Q6PE01 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp40Q6PE01 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp40Q6PE01 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp40Q6PE01 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp40Q6PE01 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp40Q6PE01 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp40Q6PE01 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp40Q6PE01 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp40Q6PE01 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Snrnp40Q6PE01 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms