Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav3-3Q5R1C3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Trav3-3Q5R1C3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav3-3Q5R1C3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav3-3Q5R1C3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3-3Q5R1C3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3-3Q5R1C3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3-3Q5R1C3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav3-3Q5R1C3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav3-3Q5R1C3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav3-3Q5R1C3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3-3Q5R1C3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3-3Q5R1C3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Trav3-3Q5R1C3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3-3Q5R1C3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3-3Q5R1C3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3-3Q5R1C3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3-3Q5R1C3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3-3Q5R1C3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav3-3Q5R1C3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav3-3Q5R1C3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav3-3Q5R1C3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav3-3Q5R1C3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav3-3Q5R1C3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Trav3-3Q5R1C3 Gm9812-201ENSMUST00000061934 968 ntBASIC15.19■□□□□ 0.02
Trav3-3Q5R1C3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Trav3-3Q5R1C3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav3-3Q5R1C3 Gm28731-201ENSMUST00000185564 1569 ntBASIC15.19■□□□□ 0.02
Trav3-3Q5R1C3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav3-3Q5R1C3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3-3Q5R1C3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav3-3Q5R1C3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3-3Q5R1C3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3-3Q5R1C3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3-3Q5R1C3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3-3Q5R1C3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3-3Q5R1C3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3-3Q5R1C3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3-3Q5R1C3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3-3Q5R1C3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3-3Q5R1C3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Trav3-3Q5R1C3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3-3Q5R1C3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3-3Q5R1C3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trav3-3Q5R1C3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-3Q5R1C3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-3Q5R1C3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-3Q5R1C3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-3Q5R1C3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav3-3Q5R1C3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-3Q5R1C3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-3Q5R1C3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-3Q5R1C3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav3-3Q5R1C3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav3-3Q5R1C3 Gm22567-201ENSMUST00000175542 342 ntBASIC15.17■□□□□ 0.02
Trav3-3Q5R1C3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav3-3Q5R1C3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-3Q5R1C3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-3Q5R1C3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav3-3Q5R1C3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav3-3Q5R1C3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-3Q5R1C3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav3-3Q5R1C3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav3-3Q5R1C3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-3Q5R1C3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-3Q5R1C3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-3Q5R1C3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3-3Q5R1C3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3-3Q5R1C3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav3-3Q5R1C3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3-3Q5R1C3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3-3Q5R1C3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav3-3Q5R1C3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3-3Q5R1C3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3-3Q5R1C3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3-3Q5R1C3 Gm7432-201ENSMUST00000210343 879 ntBASIC15.16■□□□□ 0.02
Trav3-3Q5R1C3 AC154454.1-201ENSMUST00000225253 216 ntBASIC15.16■□□□□ 0.02
Trav3-3Q5R1C3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3-3Q5R1C3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3-3Q5R1C3 Rarb-207ENSMUST00000225921 2756 ntBASIC15.16■□□□□ 0.02
Trav3-3Q5R1C3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.16■□□□□ 0.02
Trav3-3Q5R1C3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav3-3Q5R1C3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav3-3Q5R1C3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav3-3Q5R1C3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trav3-3Q5R1C3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav3-3Q5R1C3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav3-3Q5R1C3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.15■□□□□ 0.02
Trav3-3Q5R1C3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trav3-3Q5R1C3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.15■□□□□ 0.02
Trav3-3Q5R1C3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav3-3Q5R1C3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav3-3Q5R1C3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav3-3Q5R1C3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav3-3Q5R1C3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav3-3Q5R1C3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
Trav3-3Q5R1C3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav3-3Q5R1C3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav3-3Q5R1C3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav3-3Q5R1C3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms