Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Trav8d-2Q5R1B6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav8d-2Q5R1B6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav8d-2Q5R1B6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Trav8d-2Q5R1B6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trav8d-2Q5R1B6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trav8d-2Q5R1B6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Trav8d-2Q5R1B6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.14■□□□□ 0.81
Trav8d-2Q5R1B6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav8d-2Q5R1B6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.14■□□□□ 0.81
Trav8d-2Q5R1B6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav8d-2Q5R1B6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Trav8d-2Q5R1B6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav8d-2Q5R1B6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.13■□□□□ 0.81
Trav8d-2Q5R1B6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trav8d-2Q5R1B6 Gm10602-201ENSMUST00000098239 609 ntBASIC20.13■□□□□ 0.81
Trav8d-2Q5R1B6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.13■□□□□ 0.81
Trav8d-2Q5R1B6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trav8d-2Q5R1B6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trav8d-2Q5R1B6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav8d-2Q5R1B6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trav8d-2Q5R1B6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav8d-2Q5R1B6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.12■□□□□ 0.81
Trav8d-2Q5R1B6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav8d-2Q5R1B6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Trav8d-2Q5R1B6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.11■□□□□ 0.81
Trav8d-2Q5R1B6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav8d-2Q5R1B6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trav8d-2Q5R1B6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trav8d-2Q5R1B6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav8d-2Q5R1B6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav8d-2Q5R1B6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Trav8d-2Q5R1B6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trav8d-2Q5R1B6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trav8d-2Q5R1B6 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trav8d-2Q5R1B6 Gm11421-201ENSMUST00000122124 294 ntBASIC20.11■□□□□ 0.81
Trav8d-2Q5R1B6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav8d-2Q5R1B6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav8d-2Q5R1B6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trav8d-2Q5R1B6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Trav8d-2Q5R1B6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trav8d-2Q5R1B6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trav8d-2Q5R1B6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trav8d-2Q5R1B6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav8d-2Q5R1B6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav8d-2Q5R1B6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav8d-2Q5R1B6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Trav8d-2Q5R1B6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.1■□□□□ 0.81
Trav8d-2Q5R1B6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.1■□□□□ 0.81
Trav8d-2Q5R1B6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.1■□□□□ 0.81
Trav8d-2Q5R1B6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav8d-2Q5R1B6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav8d-2Q5R1B6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav8d-2Q5R1B6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.09■□□□□ 0.81
Trav8d-2Q5R1B6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trav8d-2Q5R1B6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.09■□□□□ 0.81
Trav8d-2Q5R1B6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.09■□□□□ 0.81
Trav8d-2Q5R1B6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav8d-2Q5R1B6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trav8d-2Q5R1B6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav8d-2Q5R1B6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav8d-2Q5R1B6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.09■□□□□ 0.81
Trav8d-2Q5R1B6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav8d-2Q5R1B6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav8d-2Q5R1B6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav8d-2Q5R1B6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav8d-2Q5R1B6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.08■□□□□ 0.81
Trav8d-2Q5R1B6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Trav8d-2Q5R1B6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.08■□□□□ 0.81
Trav8d-2Q5R1B6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav8d-2Q5R1B6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trav8d-2Q5R1B6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.08■□□□□ 0.8
Trav8d-2Q5R1B6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trav8d-2Q5R1B6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trav8d-2Q5R1B6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trav8d-2Q5R1B6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav8d-2Q5R1B6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav8d-2Q5R1B6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav8d-2Q5R1B6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.07■□□□□ 0.8
Trav8d-2Q5R1B6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.06■□□□□ 0.8
Trav8d-2Q5R1B6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Trav8d-2Q5R1B6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trav8d-2Q5R1B6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav8d-2Q5R1B6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav8d-2Q5R1B6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.06■□□□□ 0.8
Trav8d-2Q5R1B6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.06■□□□□ 0.8
Trav8d-2Q5R1B6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav8d-2Q5R1B6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.06■□□□□ 0.8
Trav8d-2Q5R1B6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trav8d-2Q5R1B6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav8d-2Q5R1B6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trav8d-2Q5R1B6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Trav8d-2Q5R1B6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Trav8d-2Q5R1B6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav8d-2Q5R1B6 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.05■□□□□ 0.8
Trav8d-2Q5R1B6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.05■□□□□ 0.8
Trav8d-2Q5R1B6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trav8d-2Q5R1B6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trav8d-2Q5R1B6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav8d-2Q5R1B6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms