Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.9■□□□□ 0.94
Rnf43Q5NCP0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf43Q5NCP0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.9■□□□□ 0.94
Rnf43Q5NCP0 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.9■□□□□ 0.94
Rnf43Q5NCP0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf43Q5NCP0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf43Q5NCP0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rnf43Q5NCP0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.89■□□□□ 0.94
Rnf43Q5NCP0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.89■□□□□ 0.93
Rnf43Q5NCP0 Spcs1-204ENSMUST00000226782 949 ntBASIC20.89■□□□□ 0.93
Rnf43Q5NCP0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.89■□□□□ 0.93
Rnf43Q5NCP0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Rnf43Q5NCP0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf43Q5NCP0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.88■□□□□ 0.93
Rnf43Q5NCP0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf43Q5NCP0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.88■□□□□ 0.93
Rnf43Q5NCP0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Rnf43Q5NCP0 Gm43530-201ENSMUST00000195920 274 ntBASIC20.88■□□□□ 0.93
Rnf43Q5NCP0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
Rnf43Q5NCP0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf43Q5NCP0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf43Q5NCP0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf43Q5NCP0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf43Q5NCP0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf43Q5NCP0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf43Q5NCP0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Rnf43Q5NCP0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf43Q5NCP0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Rnf43Q5NCP0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf43Q5NCP0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf43Q5NCP0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Rnf43Q5NCP0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf43Q5NCP0 Gm26833-201ENSMUST00000180899 440 ntBASIC20.86■□□□□ 0.93
Rnf43Q5NCP0 Gm7291-201ENSMUST00000199147 382 ntBASIC20.86■□□□□ 0.93
Rnf43Q5NCP0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf43Q5NCP0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf43Q5NCP0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf43Q5NCP0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf43Q5NCP0 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.86■□□□□ 0.93
Rnf43Q5NCP0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Rnf43Q5NCP0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf43Q5NCP0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf43Q5NCP0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf43Q5NCP0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.85■□□□□ 0.93
Rnf43Q5NCP0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf43Q5NCP0 Gm10493-201ENSMUST00000097270 612 ntBASIC20.85■□□□□ 0.93
Rnf43Q5NCP0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf43Q5NCP0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf43Q5NCP0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf43Q5NCP0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf43Q5NCP0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.84■□□□□ 0.93
Rnf43Q5NCP0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Rnf43Q5NCP0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf43Q5NCP0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf43Q5NCP0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.83■□□□□ 0.93
Rnf43Q5NCP0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Rnf43Q5NCP0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf43Q5NCP0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.83■□□□□ 0.93
Rnf43Q5NCP0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.83■□□□□ 0.93
Rnf43Q5NCP0 Gm43060-201ENSMUST00000200621 289 ntBASIC20.83■□□□□ 0.93
Rnf43Q5NCP0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf43Q5NCP0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf43Q5NCP0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf43Q5NCP0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf43Q5NCP0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf43Q5NCP0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf43Q5NCP0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf43Q5NCP0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.82■□□□□ 0.92
Rnf43Q5NCP0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.82■□□□□ 0.92
Rnf43Q5NCP0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf43Q5NCP0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf43Q5NCP0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf43Q5NCP0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf43Q5NCP0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf43Q5NCP0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf43Q5NCP0 Gm10849-201ENSMUST00000100397 618 ntBASIC20.81■□□□□ 0.92
Rnf43Q5NCP0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
Rnf43Q5NCP0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.81■□□□□ 0.92
Rnf43Q5NCP0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf43Q5NCP0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Rnf43Q5NCP0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf43Q5NCP0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rnf43Q5NCP0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf43Q5NCP0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf43Q5NCP0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf43Q5NCP0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf43Q5NCP0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf43Q5NCP0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf43Q5NCP0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf43Q5NCP0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf43Q5NCP0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf43Q5NCP0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Rnf43Q5NCP0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf43Q5NCP0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf43Q5NCP0 Gm27405-201ENSMUST00000184201 112 ntBASIC20.79■□□□□ 0.92
Rnf43Q5NCP0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf43Q5NCP0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf43Q5NCP0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf43Q5NCP0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Rnf43Q5NCP0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms