Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf223Q3UV31 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf223Q3UV31 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf223Q3UV31 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf223Q3UV31 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf223Q3UV31 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf223Q3UV31 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf223Q3UV31 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.92■□□□□ 0.78
Rnf223Q3UV31 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf223Q3UV31 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf223Q3UV31 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf223Q3UV31 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf223Q3UV31 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf223Q3UV31 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf223Q3UV31 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf223Q3UV31 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf223Q3UV31 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf223Q3UV31 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.91■□□□□ 0.78
Rnf223Q3UV31 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf223Q3UV31 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf223Q3UV31 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Rnf223Q3UV31 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf223Q3UV31 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Rnf223Q3UV31 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf223Q3UV31 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf223Q3UV31 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf223Q3UV31 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf223Q3UV31 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf223Q3UV31 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf223Q3UV31 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf223Q3UV31 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.9■□□□□ 0.78
Rnf223Q3UV31 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.9■□□□□ 0.78
Rnf223Q3UV31 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rnf223Q3UV31 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf223Q3UV31 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf223Q3UV31 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
Rnf223Q3UV31 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf223Q3UV31 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.89■□□□□ 0.77
Rnf223Q3UV31 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Rnf223Q3UV31 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.89■□□□□ 0.77
Rnf223Q3UV31 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.89■□□□□ 0.77
Rnf223Q3UV31 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf223Q3UV31 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf223Q3UV31 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf223Q3UV31 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Rnf223Q3UV31 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf223Q3UV31 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf223Q3UV31 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf223Q3UV31 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf223Q3UV31 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.88■□□□□ 0.77
Rnf223Q3UV31 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.88■□□□□ 0.77
Rnf223Q3UV31 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf223Q3UV31 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf223Q3UV31 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf223Q3UV31 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Rnf223Q3UV31 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf223Q3UV31 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf223Q3UV31 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf223Q3UV31 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf223Q3UV31 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.87■□□□□ 0.77
Rnf223Q3UV31 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf223Q3UV31 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf223Q3UV31 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf223Q3UV31 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.86■□□□□ 0.77
Rnf223Q3UV31 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf223Q3UV31 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf223Q3UV31 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf223Q3UV31 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf223Q3UV31 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf223Q3UV31 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Rnf223Q3UV31 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.85■□□□□ 0.77
Rnf223Q3UV31 Serp2-204ENSMUST00000228055 705 ntBASIC19.85■□□□□ 0.77
Rnf223Q3UV31 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf223Q3UV31 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Rnf223Q3UV31 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf223Q3UV31 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf223Q3UV31 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf223Q3UV31 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Rnf223Q3UV31 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Rnf223Q3UV31 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.84■□□□□ 0.77
Rnf223Q3UV31 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf223Q3UV31 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.83■□□□□ 0.77
Rnf223Q3UV31 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.83■□□□□ 0.77
Rnf223Q3UV31 Gm6139-201ENSMUST00000079261 882 ntBASIC19.83■□□□□ 0.77
Rnf223Q3UV31 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Rnf223Q3UV31 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.83■□□□□ 0.76
Rnf223Q3UV31 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf223Q3UV31 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rnf223Q3UV31 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf223Q3UV31 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.82■□□□□ 0.76
Rnf223Q3UV31 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf223Q3UV31 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf223Q3UV31 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf223Q3UV31 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Rnf223Q3UV31 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.82■□□□□ 0.76
Rnf223Q3UV31 Mir7075-201ENSMUST00000184187 82 ntBASIC19.82■□□□□ 0.76
Rnf223Q3UV31 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.82■□□□□ 0.76
Rnf223Q3UV31 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf223Q3UV31 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf223Q3UV31 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms