Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cks1brtQ3UNC9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cks1brtQ3UNC9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cks1brtQ3UNC9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cks1brtQ3UNC9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cks1brtQ3UNC9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cks1brtQ3UNC9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.78□□□□□ -0.04
Cks1brtQ3UNC9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cks1brtQ3UNC9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cks1brtQ3UNC9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cks1brtQ3UNC9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cks1brtQ3UNC9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cks1brtQ3UNC9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cks1brtQ3UNC9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cks1brtQ3UNC9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC14.77□□□□□ -0.05
Cks1brtQ3UNC9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cks1brtQ3UNC9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cks1brtQ3UNC9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cks1brtQ3UNC9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Cks1brtQ3UNC9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cks1brtQ3UNC9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cks1brtQ3UNC9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cks1brtQ3UNC9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Cks1brtQ3UNC9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cks1brtQ3UNC9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cks1brtQ3UNC9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Cks1brtQ3UNC9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cks1brtQ3UNC9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cks1brtQ3UNC9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cks1brtQ3UNC9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cks1brtQ3UNC9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cks1brtQ3UNC9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cks1brtQ3UNC9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cks1brtQ3UNC9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cks1brtQ3UNC9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.75□□□□□ -0.05
Cks1brtQ3UNC9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Cks1brtQ3UNC9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cks1brtQ3UNC9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cks1brtQ3UNC9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cks1brtQ3UNC9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.74□□□□□ -0.05
Cks1brtQ3UNC9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cks1brtQ3UNC9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cks1brtQ3UNC9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cks1brtQ3UNC9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cks1brtQ3UNC9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cks1brtQ3UNC9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cks1brtQ3UNC9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cks1brtQ3UNC9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cks1brtQ3UNC9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cks1brtQ3UNC9 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.73□□□□□ -0.05
Cks1brtQ3UNC9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC14.73□□□□□ -0.05
Cks1brtQ3UNC9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Cks1brtQ3UNC9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC14.73□□□□□ -0.05
Cks1brtQ3UNC9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cks1brtQ3UNC9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cks1brtQ3UNC9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cks1brtQ3UNC9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cks1brtQ3UNC9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks1brtQ3UNC9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks1brtQ3UNC9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks1brtQ3UNC9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks1brtQ3UNC9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cks1brtQ3UNC9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks1brtQ3UNC9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks1brtQ3UNC9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks1brtQ3UNC9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks1brtQ3UNC9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks1brtQ3UNC9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks1brtQ3UNC9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks1brtQ3UNC9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks1brtQ3UNC9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks1brtQ3UNC9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks1brtQ3UNC9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks1brtQ3UNC9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cks1brtQ3UNC9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC14.71□□□□□ -0.05
Cks1brtQ3UNC9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Cks1brtQ3UNC9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cks1brtQ3UNC9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cks1brtQ3UNC9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC14.71□□□□□ -0.06
Cks1brtQ3UNC9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cks1brtQ3UNC9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cks1brtQ3UNC9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cks1brtQ3UNC9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cks1brtQ3UNC9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cks1brtQ3UNC9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC14.7□□□□□ -0.06
Cks1brtQ3UNC9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cks1brtQ3UNC9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Cks1brtQ3UNC9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Cks1brtQ3UNC9 Gm8093-201ENSMUST00000128935 1892 ntBASIC14.7□□□□□ -0.06
Cks1brtQ3UNC9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cks1brtQ3UNC9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cks1brtQ3UNC9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cks1brtQ3UNC9 Gm24970-201ENSMUST00000175582 82 ntBASIC14.7□□□□□ -0.06
Cks1brtQ3UNC9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cks1brtQ3UNC9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cks1brtQ3UNC9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cks1brtQ3UNC9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cks1brtQ3UNC9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cks1brtQ3UNC9 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.7□□□□□ -0.06
Cks1brtQ3UNC9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms