Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.48■□□□□ 0.39
Smn1P97801 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smn1P97801 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smn1P97801 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smn1P97801 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smn1P97801 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smn1P97801 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smn1P97801 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smn1P97801 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smn1P97801 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Smn1P97801 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smn1P97801 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smn1P97801 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.47■□□□□ 0.39
Smn1P97801 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.47■□□□□ 0.39
Smn1P97801 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smn1P97801 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smn1P97801 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smn1P97801 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smn1P97801 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Smn1P97801 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smn1P97801 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smn1P97801 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smn1P97801 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.47■□□□□ 0.39
Smn1P97801 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Smn1P97801 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smn1P97801 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smn1P97801 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smn1P97801 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.46■□□□□ 0.39
Smn1P97801 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smn1P97801 Gm14523-201ENSMUST00000117260 558 ntBASIC17.46■□□□□ 0.39
Smn1P97801 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.46■□□□□ 0.39
Smn1P97801 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smn1P97801 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smn1P97801 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smn1P97801 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smn1P97801 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smn1P97801 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smn1P97801 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Smn1P97801 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smn1P97801 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smn1P97801 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smn1P97801 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Smn1P97801 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smn1P97801 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Smn1P97801 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smn1P97801 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Smn1P97801 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smn1P97801 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smn1P97801 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smn1P97801 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smn1P97801 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smn1P97801 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smn1P97801 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.44■□□□□ 0.38
Smn1P97801 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smn1P97801 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smn1P97801 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smn1P97801 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smn1P97801 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smn1P97801 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smn1P97801 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.44■□□□□ 0.38
Smn1P97801 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smn1P97801 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smn1P97801 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Smn1P97801 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smn1P97801 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smn1P97801 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smn1P97801 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smn1P97801 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.43■□□□□ 0.38
Smn1P97801 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.43■□□□□ 0.38
Smn1P97801 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Smn1P97801 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smn1P97801 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smn1P97801 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.42■□□□□ 0.38
Smn1P97801 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smn1P97801 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.42■□□□□ 0.38
Smn1P97801 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smn1P97801 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.42■□□□□ 0.38
Smn1P97801 Gm7332-201ENSMUST00000118351 454 ntBASIC17.42■□□□□ 0.38
Smn1P97801 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smn1P97801 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.42■□□□□ 0.38
Smn1P97801 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smn1P97801 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smn1P97801 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Smn1P97801 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.41■□□□□ 0.38
Smn1P97801 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smn1P97801 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smn1P97801 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smn1P97801 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smn1P97801 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smn1P97801 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smn1P97801 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Smn1P97801 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smn1P97801 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smn1P97801 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smn1P97801 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.4■□□□□ 0.38
Smn1P97801 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smn1P97801 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smn1P97801 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smn1P97801 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Smn1P97801 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms