Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smad4P97471 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smad4P97471 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smad4P97471 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smad4P97471 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smad4P97471 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Smad4P97471 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smad4P97471 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smad4P97471 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smad4P97471 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smad4P97471 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smad4P97471 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Smad4P97471 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smad4P97471 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smad4P97471 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.82■□□□□ 0.92
Smad4P97471 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.82■□□□□ 0.92
Smad4P97471 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.82■□□□□ 0.92
Smad4P97471 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smad4P97471 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smad4P97471 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Smad4P97471 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smad4P97471 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smad4P97471 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smad4P97471 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smad4P97471 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smad4P97471 Gm12441-201ENSMUST00000121806 588 ntBASIC20.81■□□□□ 0.92
Smad4P97471 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.81■□□□□ 0.92
Smad4P97471 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.81■□□□□ 0.92
Smad4P97471 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.81■□□□□ 0.92
Smad4P97471 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smad4P97471 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smad4P97471 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Smad4P97471 Gm10653-202ENSMUST00000139570 835 ntBASIC20.8■□□□□ 0.92
Smad4P97471 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.8■□□□□ 0.92
Smad4P97471 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smad4P97471 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smad4P97471 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smad4P97471 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smad4P97471 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.79■□□□□ 0.92
Smad4P97471 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smad4P97471 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smad4P97471 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smad4P97471 Gm9988-201ENSMUST00000069786 435 ntBASIC20.79■□□□□ 0.92
Smad4P97471 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Smad4P97471 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Smad4P97471 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smad4P97471 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Smad4P97471 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Smad4P97471 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Smad4P97471 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smad4P97471 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smad4P97471 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Smad4P97471 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smad4P97471 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smad4P97471 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.77■□□□□ 0.92
Smad4P97471 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smad4P97471 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smad4P97471 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smad4P97471 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smad4P97471 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smad4P97471 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Smad4P97471 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smad4P97471 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smad4P97471 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smad4P97471 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
Smad4P97471 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smad4P97471 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smad4P97471 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smad4P97471 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smad4P97471 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smad4P97471 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smad4P97471 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smad4P97471 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Smad4P97471 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.75■□□□□ 0.91
Smad4P97471 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smad4P97471 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smad4P97471 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smad4P97471 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smad4P97471 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smad4P97471 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smad4P97471 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Smad4P97471 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.74■□□□□ 0.91
Smad4P97471 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smad4P97471 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.74■□□□□ 0.91
Smad4P97471 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smad4P97471 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Smad4P97471 Gm22325-201ENSMUST00000158904 308 ntBASIC20.73■□□□□ 0.91
Smad4P97471 Gm22240-201ENSMUST00000175225 82 ntBASIC20.73■□□□□ 0.91
Smad4P97471 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.73■□□□□ 0.91
Smad4P97471 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smad4P97471 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smad4P97471 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smad4P97471 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smad4P97471 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smad4P97471 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smad4P97471 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Smad4P97471 Gm13234-201ENSMUST00000120010 747 ntBASIC20.72■□□□□ 0.91
Smad4P97471 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Smad4P97471 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smad4P97471 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms