Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC14.41□□□□□ -0.1
PrkdcP97313 Gm6934-201ENSMUST00000194780 1905 ntBASIC14.41□□□□□ -0.1
PrkdcP97313 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PrkdcP97313 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PrkdcP97313 Gm13168-201ENSMUST00000121771 632 ntBASIC14.4□□□□□ -0.1
PrkdcP97313 Mir6982-201ENSMUST00000184354 68 ntBASIC14.4□□□□□ -0.1
PrkdcP97313 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PrkdcP97313 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PrkdcP97313 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PrkdcP97313 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PrkdcP97313 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PrkdcP97313 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
PrkdcP97313 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PrkdcP97313 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.39□□□□□ -0.11
PrkdcP97313 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PrkdcP97313 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
PrkdcP97313 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PrkdcP97313 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.39□□□□□ -0.11
PrkdcP97313 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.39□□□□□ -0.11
PrkdcP97313 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.39□□□□□ -0.11
PrkdcP97313 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PrkdcP97313 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PrkdcP97313 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PrkdcP97313 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PrkdcP97313 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PrkdcP97313 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PrkdcP97313 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PrkdcP97313 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PrkdcP97313 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.39□□□□□ -0.11
PrkdcP97313 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PrkdcP97313 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.38□□□□□ -0.11
PrkdcP97313 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PrkdcP97313 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PrkdcP97313 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.38□□□□□ -0.11
PrkdcP97313 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PrkdcP97313 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC14.38□□□□□ -0.11
PrkdcP97313 Gm20049-201ENSMUST00000219950 730 ntBASIC14.38□□□□□ -0.11
PrkdcP97313 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PrkdcP97313 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PrkdcP97313 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PrkdcP97313 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PrkdcP97313 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.37□□□□□ -0.11
PrkdcP97313 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PrkdcP97313 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PrkdcP97313 Reep4-203ENSMUST00000226563 1444 ntBASIC14.36□□□□□ -0.11
PrkdcP97313 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PrkdcP97313 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PrkdcP97313 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.36□□□□□ -0.11
PrkdcP97313 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PrkdcP97313 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PrkdcP97313 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PrkdcP97313 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PrkdcP97313 Mir5133-201ENSMUST00000174955 77 ntBASIC14.36□□□□□ -0.11
PrkdcP97313 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PrkdcP97313 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.36□□□□□ -0.11
PrkdcP97313 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PrkdcP97313 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PrkdcP97313 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PrkdcP97313 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PrkdcP97313 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PrkdcP97313 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PrkdcP97313 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PrkdcP97313 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PrkdcP97313 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PrkdcP97313 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.35□□□□□ -0.11
PrkdcP97313 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PrkdcP97313 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
PrkdcP97313 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PrkdcP97313 Gm8520-201ENSMUST00000186517 868 ntBASIC14.35□□□□□ -0.11
PrkdcP97313 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.35□□□□□ -0.11
PrkdcP97313 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PrkdcP97313 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC14.35□□□□□ -0.11
PrkdcP97313 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PrkdcP97313 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PrkdcP97313 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
PrkdcP97313 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PrkdcP97313 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PrkdcP97313 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
PrkdcP97313 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PrkdcP97313 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.34□□□□□ -0.11
PrkdcP97313 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PrkdcP97313 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PrkdcP97313 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PrkdcP97313 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PrkdcP97313 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PrkdcP97313 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PrkdcP97313 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PrkdcP97313 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PrkdcP97313 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
PrkdcP97313 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PrkdcP97313 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PrkdcP97313 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PrkdcP97313 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PrkdcP97313 Gm37856-201ENSMUST00000191634 999 ntBASIC14.33□□□□□ -0.12
PrkdcP97313 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PrkdcP97313 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC14.33□□□□□ -0.12
PrkdcP97313 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PrkdcP97313 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PrkdcP97313 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkdcP97313 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms