Protein–RNA interactions for Protein: P70343

Casp4, Caspase-4, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp4P70343 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Casp4P70343 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Casp4P70343 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Casp4P70343 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.33■■□□□ 1.01
Casp4P70343 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Casp4P70343 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.33■■□□□ 1.01
Casp4P70343 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Casp4P70343 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Casp4P70343 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.33■■□□□ 1
Casp4P70343 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Casp4P70343 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.33■■□□□ 1
Casp4P70343 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.32■■□□□ 1
Casp4P70343 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.32■■□□□ 1
Casp4P70343 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.32■■□□□ 1
Casp4P70343 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.32■■□□□ 1
Casp4P70343 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.32■■□□□ 1
Casp4P70343 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Casp4P70343 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Casp4P70343 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Casp4P70343 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.31■■□□□ 1
Casp4P70343 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.31■■□□□ 1
Casp4P70343 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.31■■□□□ 1
Casp4P70343 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.31■■□□□ 1
Casp4P70343 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Casp4P70343 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Casp4P70343 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.3■■□□□ 1
Casp4P70343 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.3■■□□□ 1
Casp4P70343 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Casp4P70343 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Casp4P70343 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.3■■□□□ 1
Casp4P70343 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Casp4P70343 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Casp4P70343 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Casp4P70343 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Casp4P70343 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.29■■□□□ 1
Casp4P70343 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Casp4P70343 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.29■■□□□ 1
Casp4P70343 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.29■■□□□ 1
Casp4P70343 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Casp4P70343 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Casp4P70343 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.28■■□□□ 1
Casp4P70343 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.28■■□□□ 1
Casp4P70343 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Casp4P70343 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Casp4P70343 Gm7417-201ENSMUST00000192950 473 ntBASIC21.28■■□□□ 1
Casp4P70343 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.28■■□□□ 1
Casp4P70343 Gm40881-201ENSMUST00000223397 166 ntBASIC21.28■■□□□ 1
Casp4P70343 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Casp4P70343 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Casp4P70343 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Casp4P70343 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Casp4P70343 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.27■■□□□ 1
Casp4P70343 Gm10399-202ENSMUST00000202768 748 ntBASIC21.27■■□□□ 1
Casp4P70343 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Casp4P70343 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Casp4P70343 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Casp4P70343 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Casp4P70343 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Casp4P70343 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Casp4P70343 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Casp4P70343 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Casp4P70343 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Casp4P70343 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Casp4P70343 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Casp4P70343 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.25■□□□□ 0.99
Casp4P70343 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Casp4P70343 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
Casp4P70343 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Casp4P70343 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.25■□□□□ 0.99
Casp4P70343 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Casp4P70343 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Casp4P70343 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Casp4P70343 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Casp4P70343 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Casp4P70343 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Casp4P70343 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Casp4P70343 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.24■□□□□ 0.99
Casp4P70343 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Casp4P70343 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Casp4P70343 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.24■□□□□ 0.99
Casp4P70343 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Casp4P70343 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.23■□□□□ 0.99
Casp4P70343 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Casp4P70343 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Casp4P70343 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.23■□□□□ 0.99
Casp4P70343 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.23■□□□□ 0.99
Casp4P70343 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Casp4P70343 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.23■□□□□ 0.99
Casp4P70343 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.23■□□□□ 0.99
Casp4P70343 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Casp4P70343 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Casp4P70343 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Casp4P70343 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.23■□□□□ 0.99
Casp4P70343 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Casp4P70343 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Casp4P70343 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Casp4P70343 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Casp4P70343 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Casp4P70343 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Casp4P70343 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms