Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.93■□□□□ 0.3
Pdlim4P70271 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim4P70271 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim4P70271 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pdlim4P70271 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.93■□□□□ 0.3
Pdlim4P70271 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim4P70271 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim4P70271 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim4P70271 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.92■□□□□ 0.3
Pdlim4P70271 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim4P70271 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim4P70271 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pdlim4P70271 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.92■□□□□ 0.3
Pdlim4P70271 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim4P70271 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.92■□□□□ 0.3
Pdlim4P70271 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim4P70271 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pdlim4P70271 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim4P70271 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim4P70271 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdlim4P70271 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.91■□□□□ 0.3
Pdlim4P70271 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim4P70271 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim4P70271 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.91■□□□□ 0.3
Pdlim4P70271 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim4P70271 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pdlim4P70271 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdlim4P70271 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
Pdlim4P70271 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pdlim4P70271 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdlim4P70271 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdlim4P70271 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pdlim4P70271 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdlim4P70271 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pdlim4P70271 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pdlim4P70271 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pdlim4P70271 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
Pdlim4P70271 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdlim4P70271 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdlim4P70271 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Pdlim4P70271 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdlim4P70271 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdlim4P70271 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdlim4P70271 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Pdlim4P70271 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim4P70271 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim4P70271 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim4P70271 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.88■□□□□ 0.29
Pdlim4P70271 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim4P70271 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.88■□□□□ 0.29
Pdlim4P70271 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim4P70271 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim4P70271 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim4P70271 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim4P70271 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim4P70271 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim4P70271 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim4P70271 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim4P70271 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim4P70271 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.87■□□□□ 0.29
Pdlim4P70271 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim4P70271 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim4P70271 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim4P70271 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.86■□□□□ 0.29
Pdlim4P70271 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim4P70271 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pdlim4P70271 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim4P70271 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim4P70271 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim4P70271 Gm22238-201ENSMUST00000175222 88 ntBASIC16.86■□□□□ 0.29
Pdlim4P70271 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim4P70271 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Pdlim4P70271 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Pdlim4P70271 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim4P70271 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.86■□□□□ 0.29
Pdlim4P70271 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim4P70271 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim4P70271 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.85■□□□□ 0.29
Pdlim4P70271 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim4P70271 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim4P70271 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim4P70271 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim4P70271 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim4P70271 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Pdlim4P70271 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pdlim4P70271 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim4P70271 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim4P70271 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim4P70271 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim4P70271 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim4P70271 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim4P70271 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim4P70271 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdlim4P70271 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdlim4P70271 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pdlim4P70271 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdlim4P70271 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.84■□□□□ 0.29
Pdlim4P70271 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.84■□□□□ 0.29
Pdlim4P70271 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdlim4P70271 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms