Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdkn2bP55271 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdkn2bP55271 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cdkn2bP55271 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.65■□□□□ 0.74
Cdkn2bP55271 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdkn2bP55271 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
Cdkn2bP55271 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdkn2bP55271 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdkn2bP55271 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdkn2bP55271 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdkn2bP55271 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cdkn2bP55271 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cdkn2bP55271 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdkn2bP55271 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdkn2bP55271 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cdkn2bP55271 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdkn2bP55271 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkn2bP55271 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cdkn2bP55271 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkn2bP55271 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkn2bP55271 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkn2bP55271 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Cdkn2bP55271 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkn2bP55271 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkn2bP55271 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cdkn2bP55271 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.62■□□□□ 0.73
Cdkn2bP55271 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cdkn2bP55271 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cdkn2bP55271 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdkn2bP55271 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdkn2bP55271 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdkn2bP55271 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.62■□□□□ 0.73
Cdkn2bP55271 Mir6538-201ENSMUST00000183713 110 ntBASIC19.62■□□□□ 0.73
Cdkn2bP55271 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdkn2bP55271 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdkn2bP55271 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdkn2bP55271 Golph3-202ENSMUST00000226517 2359 ntBASIC19.62■□□□□ 0.73
Cdkn2bP55271 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdkn2bP55271 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdkn2bP55271 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkn2bP55271 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkn2bP55271 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkn2bP55271 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkn2bP55271 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cdkn2bP55271 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkn2bP55271 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkn2bP55271 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.61■□□□□ 0.73
Cdkn2bP55271 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkn2bP55271 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkn2bP55271 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkn2bP55271 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkn2bP55271 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkn2bP55271 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkn2bP55271 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkn2bP55271 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cdkn2bP55271 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.6■□□□□ 0.73
Cdkn2bP55271 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdkn2bP55271 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdkn2bP55271 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.6■□□□□ 0.73
Cdkn2bP55271 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.6■□□□□ 0.73
Cdkn2bP55271 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.6■□□□□ 0.73
Cdkn2bP55271 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cdkn2bP55271 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdkn2bP55271 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cdkn2bP55271 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdkn2bP55271 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Cdkn2bP55271 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdkn2bP55271 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdkn2bP55271 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cdkn2bP55271 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.59■□□□□ 0.73
Cdkn2bP55271 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdkn2bP55271 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdkn2bP55271 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdkn2bP55271 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cdkn2bP55271 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.59■□□□□ 0.73
Cdkn2bP55271 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdkn2bP55271 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdkn2bP55271 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdkn2bP55271 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.58■□□□□ 0.73
Cdkn2bP55271 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdkn2bP55271 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdkn2bP55271 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Cdkn2bP55271 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
Cdkn2bP55271 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdkn2bP55271 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdkn2bP55271 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cdkn2bP55271 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cdkn2bP55271 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdkn2bP55271 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Cdkn2bP55271 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdkn2bP55271 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdkn2bP55271 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Cdkn2bP55271 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdkn2bP55271 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdkn2bP55271 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdkn2bP55271 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdkn2bP55271 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdkn2bP55271 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdkn2bP55271 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.56■□□□□ 0.72
Cdkn2bP55271 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms