Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmga2P52927 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hmga2P52927 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmga2P52927 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmga2P52927 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hmga2P52927 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.44■□□□□ 0.38
Hmga2P52927 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmga2P52927 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Hmga2P52927 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.43■□□□□ 0.38
Hmga2P52927 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmga2P52927 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmga2P52927 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hmga2P52927 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.43■□□□□ 0.38
Hmga2P52927 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmga2P52927 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmga2P52927 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmga2P52927 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmga2P52927 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.42■□□□□ 0.38
Hmga2P52927 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmga2P52927 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmga2P52927 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmga2P52927 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga2P52927 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga2P52927 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga2P52927 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga2P52927 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga2P52927 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga2P52927 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga2P52927 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga2P52927 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga2P52927 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga2P52927 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmga2P52927 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.4■□□□□ 0.38
Hmga2P52927 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmga2P52927 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
Hmga2P52927 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmga2P52927 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmga2P52927 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmga2P52927 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmga2P52927 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmga2P52927 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hmga2P52927 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmga2P52927 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Hmga2P52927 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.39■□□□□ 0.37
Hmga2P52927 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hmga2P52927 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmga2P52927 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Hmga2P52927 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmga2P52927 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Hmga2P52927 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmga2P52927 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Hmga2P52927 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmga2P52927 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmga2P52927 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.38■□□□□ 0.37
Hmga2P52927 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmga2P52927 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmga2P52927 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmga2P52927 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hmga2P52927 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hmga2P52927 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.38■□□□□ 0.37
Hmga2P52927 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmga2P52927 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga2P52927 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga2P52927 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga2P52927 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.37■□□□□ 0.37
Hmga2P52927 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga2P52927 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga2P52927 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga2P52927 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga2P52927 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga2P52927 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga2P52927 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga2P52927 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Hmga2P52927 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hmga2P52927 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.36■□□□□ 0.37
Hmga2P52927 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.36■□□□□ 0.37
Hmga2P52927 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hmga2P52927 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmga2P52927 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmga2P52927 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.36■□□□□ 0.37
Hmga2P52927 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmga2P52927 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmga2P52927 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.35■□□□□ 0.37
Hmga2P52927 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hmga2P52927 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmga2P52927 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmga2P52927 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hmga2P52927 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmga2P52927 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Hmga2P52927 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hmga2P52927 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.34■□□□□ 0.37
Hmga2P52927 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmga2P52927 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Hmga2P52927 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Hmga2P52927 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmga2P52927 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmga2P52927 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmga2P52927 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmga2P52927 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.33■□□□□ 0.36
Hmga2P52927 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms