Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lhx3P50481 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lhx3P50481 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.85■□□□□ 0.93
Lhx3P50481 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lhx3P50481 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.85■□□□□ 0.93
Lhx3P50481 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Lhx3P50481 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx3P50481 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx3P50481 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Lhx3P50481 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx3P50481 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx3P50481 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx3P50481 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx3P50481 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.84■□□□□ 0.93
Lhx3P50481 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx3P50481 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx3P50481 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx3P50481 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lhx3P50481 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lhx3P50481 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lhx3P50481 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Lhx3P50481 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.83■□□□□ 0.93
Lhx3P50481 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lhx3P50481 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Lhx3P50481 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Lhx3P50481 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lhx3P50481 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lhx3P50481 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lhx3P50481 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.82■□□□□ 0.92
Lhx3P50481 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.82■□□□□ 0.92
Lhx3P50481 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.82■□□□□ 0.92
Lhx3P50481 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lhx3P50481 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lhx3P50481 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lhx3P50481 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Lhx3P50481 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lhx3P50481 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lhx3P50481 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lhx3P50481 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lhx3P50481 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.81■□□□□ 0.92
Lhx3P50481 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lhx3P50481 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lhx3P50481 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.8■□□□□ 0.92
Lhx3P50481 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lhx3P50481 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lhx3P50481 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.8■□□□□ 0.92
Lhx3P50481 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lhx3P50481 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lhx3P50481 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lhx3P50481 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lhx3P50481 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lhx3P50481 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lhx3P50481 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Lhx3P50481 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lhx3P50481 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.79■□□□□ 0.92
Lhx3P50481 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lhx3P50481 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Lhx3P50481 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lhx3P50481 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lhx3P50481 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lhx3P50481 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lhx3P50481 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lhx3P50481 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.78■□□□□ 0.92
Lhx3P50481 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.78■□□□□ 0.92
Lhx3P50481 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Lhx3P50481 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lhx3P50481 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lhx3P50481 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lhx3P50481 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lhx3P50481 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lhx3P50481 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.77■□□□□ 0.91
Lhx3P50481 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lhx3P50481 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx3P50481 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx3P50481 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx3P50481 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx3P50481 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx3P50481 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx3P50481 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx3P50481 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx3P50481 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Lhx3P50481 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx3P50481 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx3P50481 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx3P50481 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx3P50481 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx3P50481 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx3P50481 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx3P50481 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
Lhx3P50481 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx3P50481 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx3P50481 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.75■□□□□ 0.91
Lhx3P50481 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Lhx3P50481 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx3P50481 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Lhx3P50481 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.74■□□□□ 0.91
Lhx3P50481 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx3P50481 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
Lhx3P50481 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx3P50481 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms