Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GdnfP48540 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GdnfP48540 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
GdnfP48540 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GdnfP48540 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GdnfP48540 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
GdnfP48540 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.78■□□□□ 0.44
GdnfP48540 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
GdnfP48540 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GdnfP48540 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GdnfP48540 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.77■□□□□ 0.44
GdnfP48540 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GdnfP48540 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
GdnfP48540 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
GdnfP48540 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GdnfP48540 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GdnfP48540 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
GdnfP48540 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.76■□□□□ 0.43
GdnfP48540 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GdnfP48540 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GdnfP48540 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GdnfP48540 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
GdnfP48540 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
GdnfP48540 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GdnfP48540 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.76■□□□□ 0.43
GdnfP48540 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GdnfP48540 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.76■□□□□ 0.43
GdnfP48540 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
GdnfP48540 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GdnfP48540 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GdnfP48540 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GdnfP48540 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GdnfP48540 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GdnfP48540 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GdnfP48540 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GdnfP48540 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
GdnfP48540 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GdnfP48540 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GdnfP48540 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.75■□□□□ 0.43
GdnfP48540 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.75■□□□□ 0.43
GdnfP48540 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
GdnfP48540 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GdnfP48540 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GdnfP48540 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GdnfP48540 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
GdnfP48540 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GdnfP48540 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GdnfP48540 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GdnfP48540 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.74■□□□□ 0.43
GdnfP48540 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
GdnfP48540 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GdnfP48540 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.74■□□□□ 0.43
GdnfP48540 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GdnfP48540 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.74■□□□□ 0.43
GdnfP48540 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GdnfP48540 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GdnfP48540 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GdnfP48540 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GdnfP48540 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GdnfP48540 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.73■□□□□ 0.43
GdnfP48540 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.73■□□□□ 0.43
GdnfP48540 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.73■□□□□ 0.43
GdnfP48540 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GdnfP48540 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GdnfP48540 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GdnfP48540 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GdnfP48540 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GdnfP48540 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GdnfP48540 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GdnfP48540 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GdnfP48540 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.72■□□□□ 0.43
GdnfP48540 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.72■□□□□ 0.43
GdnfP48540 Gm13238-201ENSMUST00000117655 780 ntBASIC17.72■□□□□ 0.43
GdnfP48540 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.72■□□□□ 0.43
GdnfP48540 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
GdnfP48540 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
GdnfP48540 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.71■□□□□ 0.43
GdnfP48540 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
GdnfP48540 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GdnfP48540 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GdnfP48540 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GdnfP48540 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GdnfP48540 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GdnfP48540 Gm5921-201ENSMUST00000075898 882 ntBASIC17.71■□□□□ 0.43
GdnfP48540 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GdnfP48540 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GdnfP48540 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GdnfP48540 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GdnfP48540 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GdnfP48540 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GdnfP48540 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GdnfP48540 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.7■□□□□ 0.42
GdnfP48540 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GdnfP48540 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
GdnfP48540 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
GdnfP48540 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
GdnfP48540 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GdnfP48540 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GdnfP48540 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GdnfP48540 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms