Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prox1P48437 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Prox1P48437 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prox1P48437 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prox1P48437 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prox1P48437 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prox1P48437 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Prox1P48437 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prox1P48437 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prox1P48437 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Prox1P48437 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prox1P48437 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prox1P48437 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.47■□□□□ 0.71
Prox1P48437 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prox1P48437 Gm14523-201ENSMUST00000117260 558 ntBASIC19.47■□□□□ 0.71
Prox1P48437 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.47■□□□□ 0.71
Prox1P48437 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.47■□□□□ 0.71
Prox1P48437 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.47■□□□□ 0.71
Prox1P48437 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prox1P48437 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Prox1P48437 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prox1P48437 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prox1P48437 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prox1P48437 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Prox1P48437 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prox1P48437 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.45■□□□□ 0.7
Prox1P48437 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Prox1P48437 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prox1P48437 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prox1P48437 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prox1P48437 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prox1P48437 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Prox1P48437 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prox1P48437 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.44■□□□□ 0.7
Prox1P48437 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.44■□□□□ 0.7
Prox1P48437 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.44■□□□□ 0.7
Prox1P48437 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prox1P48437 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prox1P48437 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prox1P48437 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Prox1P48437 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Prox1P48437 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prox1P48437 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prox1P48437 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prox1P48437 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prox1P48437 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prox1P48437 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prox1P48437 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prox1P48437 Gm7332-201ENSMUST00000118351 454 ntBASIC19.43■□□□□ 0.7
Prox1P48437 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prox1P48437 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prox1P48437 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prox1P48437 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prox1P48437 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Prox1P48437 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Prox1P48437 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prox1P48437 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prox1P48437 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prox1P48437 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Prox1P48437 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prox1P48437 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Prox1P48437 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.42■□□□□ 0.7
Prox1P48437 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.42■□□□□ 0.7
Prox1P48437 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prox1P48437 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prox1P48437 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Prox1P48437 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.41■□□□□ 0.7
Prox1P48437 Gm12366-201ENSMUST00000121722 873 ntBASIC19.41■□□□□ 0.7
Prox1P48437 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.41■□□□□ 0.7
Prox1P48437 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.41■□□□□ 0.7
Prox1P48437 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.41■□□□□ 0.7
Prox1P48437 Gm5786-201ENSMUST00000085368 882 ntBASIC19.41■□□□□ 0.7
Prox1P48437 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.41■□□□□ 0.7
Prox1P48437 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Prox1P48437 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.41■□□□□ 0.7
Prox1P48437 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prox1P48437 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.41■□□□□ 0.7
Prox1P48437 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prox1P48437 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prox1P48437 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prox1P48437 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prox1P48437 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prox1P48437 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.4■□□□□ 0.7
Prox1P48437 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.4■□□□□ 0.7
Prox1P48437 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prox1P48437 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Prox1P48437 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prox1P48437 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prox1P48437 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prox1P48437 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prox1P48437 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prox1P48437 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Prox1P48437 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.39■□□□□ 0.7
Prox1P48437 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prox1P48437 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prox1P48437 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prox1P48437 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prox1P48437 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prox1P48437 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Prox1P48437 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms