Protein–RNA interactions for Protein: P47741

Tnfrsf4, Tumor necrosis factor receptor superfamily member 4, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf4P47741 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfrsf4P47741 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.77■□□□□ 0.92
Tnfrsf4P47741 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.77■□□□□ 0.92
Tnfrsf4P47741 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfrsf4P47741 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfrsf4P47741 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfrsf4P47741 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfrsf4P47741 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Tnfrsf4P47741 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfrsf4P47741 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfrsf4P47741 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.76■□□□□ 0.91
Tnfrsf4P47741 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfrsf4P47741 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Tnfrsf4P47741 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.76■□□□□ 0.91
Tnfrsf4P47741 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Tnfrsf4P47741 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf4P47741 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.75■□□□□ 0.91
Tnfrsf4P47741 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf4P47741 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Tnfrsf4P47741 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Tnfrsf4P47741 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Tnfrsf4P47741 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Tnfrsf4P47741 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf4P47741 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf4P47741 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf4P47741 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf4P47741 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Tnfrsf4P47741 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.73■□□□□ 0.91
Tnfrsf4P47741 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf4P47741 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.72■□□□□ 0.91
Tnfrsf4P47741 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Tnfrsf4P47741 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Tnfrsf4P47741 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf4P47741 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf4P47741 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Tnfrsf4P47741 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf4P47741 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf4P47741 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Tnfrsf4P47741 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.71■□□□□ 0.91
Tnfrsf4P47741 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf4P47741 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf4P47741 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.71■□□□□ 0.91
Tnfrsf4P47741 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf4P47741 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf4P47741 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf4P47741 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Tnfrsf4P47741 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf4P47741 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf4P47741 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf4P47741 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf4P47741 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf4P47741 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf4P47741 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf4P47741 Gm37179-201ENSMUST00000194862 823 ntBASIC20.7■□□□□ 0.9
Tnfrsf4P47741 Gm18671-201ENSMUST00000214826 683 ntBASIC20.7■□□□□ 0.9
Tnfrsf4P47741 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf4P47741 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf4P47741 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf4P47741 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf4P47741 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf4P47741 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.69■□□□□ 0.9
Tnfrsf4P47741 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf4P47741 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf4P47741 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.69■□□□□ 0.9
Tnfrsf4P47741 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Tnfrsf4P47741 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf4P47741 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.69■□□□□ 0.9
Tnfrsf4P47741 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.69■□□□□ 0.9
Tnfrsf4P47741 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfrsf4P47741 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.68■□□□□ 0.9
Tnfrsf4P47741 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfrsf4P47741 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Tnfrsf4P47741 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfrsf4P47741 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfrsf4P47741 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.68■□□□□ 0.9
Tnfrsf4P47741 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.68■□□□□ 0.9
Tnfrsf4P47741 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfrsf4P47741 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf4P47741 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Tnfrsf4P47741 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf4P47741 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf4P47741 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Tnfrsf4P47741 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf4P47741 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf4P47741 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf4P47741 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf4P47741 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf4P47741 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.66■□□□□ 0.9
Tnfrsf4P47741 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf4P47741 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf4P47741 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.66■□□□□ 0.9
Tnfrsf4P47741 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf4P47741 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf4P47741 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Tnfrsf4P47741 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf4P47741 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf4P47741 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf4P47741 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf4P47741 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf4P47741 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms