Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Msh2P43247 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Msh2P43247 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Msh2P43247 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msh2P43247 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msh2P43247 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msh2P43247 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msh2P43247 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Msh2P43247 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.01■□□□□ 0.95
Msh2P43247 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msh2P43247 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Msh2P43247 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Msh2P43247 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Msh2P43247 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Msh2P43247 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Msh2P43247 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21■□□□□ 0.95
Msh2P43247 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Msh2P43247 Gm28536-201ENSMUST00000190971 1317 ntBASIC21■□□□□ 0.95
Msh2P43247 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Msh2P43247 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Msh2P43247 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh2P43247 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh2P43247 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh2P43247 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Msh2P43247 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.99■□□□□ 0.95
Msh2P43247 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh2P43247 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh2P43247 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh2P43247 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Msh2P43247 Gm5812-201ENSMUST00000061073 957 ntBASIC20.99■□□□□ 0.95
Msh2P43247 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Msh2P43247 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Msh2P43247 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh2P43247 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh2P43247 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Msh2P43247 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh2P43247 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Msh2P43247 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Msh2P43247 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Msh2P43247 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh2P43247 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Msh2P43247 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh2P43247 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
Msh2P43247 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.97■□□□□ 0.95
Msh2P43247 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh2P43247 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh2P43247 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh2P43247 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh2P43247 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh2P43247 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.97■□□□□ 0.95
Msh2P43247 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.97■□□□□ 0.95
Msh2P43247 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh2P43247 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh2P43247 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh2P43247 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh2P43247 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.97■□□□□ 0.95
Msh2P43247 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Msh2P43247 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Msh2P43247 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Msh2P43247 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Msh2P43247 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Msh2P43247 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Msh2P43247 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.96■□□□□ 0.95
Msh2P43247 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.96■□□□□ 0.95
Msh2P43247 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Msh2P43247 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Msh2P43247 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.96■□□□□ 0.95
Msh2P43247 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Msh2P43247 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Msh2P43247 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
Msh2P43247 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Msh2P43247 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Msh2P43247 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Msh2P43247 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Msh2P43247 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Msh2P43247 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Msh2P43247 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Msh2P43247 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Msh2P43247 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Msh2P43247 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Msh2P43247 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Msh2P43247 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Msh2P43247 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Msh2P43247 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Msh2P43247 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Msh2P43247 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Msh2P43247 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Msh2P43247 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Msh2P43247 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Msh2P43247 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.93■□□□□ 0.94
Msh2P43247 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Msh2P43247 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.93■□□□□ 0.94
Msh2P43247 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Msh2P43247 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Msh2P43247 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Msh2P43247 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Msh2P43247 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Msh2P43247 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Msh2P43247 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Msh2P43247 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 263.5 ms