Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LdlrP35951 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LdlrP35951 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LdlrP35951 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LdlrP35951 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LdlrP35951 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LdlrP35951 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LdlrP35951 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LdlrP35951 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LdlrP35951 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LdlrP35951 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.3■□□□□ 0.84
LdlrP35951 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LdlrP35951 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LdlrP35951 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LdlrP35951 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LdlrP35951 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LdlrP35951 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.29■□□□□ 0.84
LdlrP35951 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.29■□□□□ 0.84
LdlrP35951 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LdlrP35951 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LdlrP35951 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.29■□□□□ 0.84
LdlrP35951 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LdlrP35951 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LdlrP35951 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LdlrP35951 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LdlrP35951 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LdlrP35951 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LdlrP35951 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
LdlrP35951 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LdlrP35951 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LdlrP35951 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
LdlrP35951 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LdlrP35951 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LdlrP35951 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
LdlrP35951 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LdlrP35951 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.27■□□□□ 0.84
LdlrP35951 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LdlrP35951 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LdlrP35951 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LdlrP35951 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.27■□□□□ 0.83
LdlrP35951 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LdlrP35951 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LdlrP35951 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LdlrP35951 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LdlrP35951 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LdlrP35951 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LdlrP35951 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.26■□□□□ 0.83
LdlrP35951 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LdlrP35951 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LdlrP35951 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LdlrP35951 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LdlrP35951 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LdlrP35951 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LdlrP35951 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LdlrP35951 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LdlrP35951 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LdlrP35951 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LdlrP35951 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LdlrP35951 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LdlrP35951 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LdlrP35951 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LdlrP35951 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LdlrP35951 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LdlrP35951 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LdlrP35951 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LdlrP35951 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LdlrP35951 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.23■□□□□ 0.83
LdlrP35951 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LdlrP35951 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LdlrP35951 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
LdlrP35951 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LdlrP35951 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LdlrP35951 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LdlrP35951 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LdlrP35951 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.23■□□□□ 0.83
LdlrP35951 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
LdlrP35951 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LdlrP35951 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.22■□□□□ 0.83
LdlrP35951 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LdlrP35951 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.22■□□□□ 0.83
LdlrP35951 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LdlrP35951 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LdlrP35951 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LdlrP35951 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LdlrP35951 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LdlrP35951 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LdlrP35951 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LdlrP35951 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LdlrP35951 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LdlrP35951 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LdlrP35951 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LdlrP35951 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.21■□□□□ 0.83
LdlrP35951 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.21■□□□□ 0.83
LdlrP35951 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LdlrP35951 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LdlrP35951 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LdlrP35951 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LdlrP35951 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LdlrP35951 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
LdlrP35951 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms