Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd40P27512 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cd40P27512 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cd40P27512 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd40P27512 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd40P27512 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd40P27512 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd40P27512 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cd40P27512 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cd40P27512 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd40P27512 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.53■□□□□ 0.56
Cd40P27512 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cd40P27512 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd40P27512 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd40P27512 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
Cd40P27512 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd40P27512 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd40P27512 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd40P27512 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cd40P27512 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cd40P27512 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
Cd40P27512 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.52■□□□□ 0.56
Cd40P27512 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cd40P27512 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Cd40P27512 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.52■□□□□ 0.56
Cd40P27512 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Cd40P27512 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cd40P27512 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cd40P27512 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd40P27512 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd40P27512 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Cd40P27512 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cd40P27512 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.51■□□□□ 0.55
Cd40P27512 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cd40P27512 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd40P27512 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd40P27512 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd40P27512 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
Cd40P27512 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cd40P27512 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.5■□□□□ 0.55
Cd40P27512 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cd40P27512 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd40P27512 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.5■□□□□ 0.55
Cd40P27512 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd40P27512 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cd40P27512 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cd40P27512 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cd40P27512 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.49■□□□□ 0.55
Cd40P27512 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd40P27512 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd40P27512 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd40P27512 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd40P27512 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cd40P27512 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cd40P27512 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cd40P27512 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Cd40P27512 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.48■□□□□ 0.55
Cd40P27512 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.48■□□□□ 0.55
Cd40P27512 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Cd40P27512 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cd40P27512 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cd40P27512 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Cd40P27512 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.47■□□□□ 0.55
Cd40P27512 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.47■□□□□ 0.55
Cd40P27512 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.47■□□□□ 0.55
Cd40P27512 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cd40P27512 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cd40P27512 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cd40P27512 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Cd40P27512 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cd40P27512 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cd40P27512 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cd40P27512 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cd40P27512 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.46■□□□□ 0.55
Cd40P27512 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Cd40P27512 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Cd40P27512 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cd40P27512 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cd40P27512 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cd40P27512 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cd40P27512 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cd40P27512 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.45■□□□□ 0.54
Cd40P27512 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.45■□□□□ 0.54
Cd40P27512 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cd40P27512 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cd40P27512 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cd40P27512 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cd40P27512 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cd40P27512 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd40P27512 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Cd40P27512 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd40P27512 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Cd40P27512 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Cd40P27512 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cd40P27512 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.44■□□□□ 0.54
Cd40P27512 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd40P27512 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Cd40P27512 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
Cd40P27512 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cd40P27512 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms