Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
BdnfP21237 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BdnfP21237 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
BdnfP21237 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
BdnfP21237 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BdnfP21237 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BdnfP21237 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.52■□□□□ 0.72
BdnfP21237 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BdnfP21237 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
BdnfP21237 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BdnfP21237 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BdnfP21237 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
BdnfP21237 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BdnfP21237 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
BdnfP21237 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BdnfP21237 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BdnfP21237 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BdnfP21237 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.51■□□□□ 0.71
BdnfP21237 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BdnfP21237 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.51■□□□□ 0.71
BdnfP21237 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BdnfP21237 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BdnfP21237 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
BdnfP21237 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BdnfP21237 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BdnfP21237 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BdnfP21237 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BdnfP21237 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BdnfP21237 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.5■□□□□ 0.71
BdnfP21237 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BdnfP21237 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
BdnfP21237 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.5■□□□□ 0.71
BdnfP21237 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BdnfP21237 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
BdnfP21237 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BdnfP21237 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.49■□□□□ 0.71
BdnfP21237 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
BdnfP21237 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BdnfP21237 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BdnfP21237 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.49■□□□□ 0.71
BdnfP21237 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BdnfP21237 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
BdnfP21237 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BdnfP21237 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BdnfP21237 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BdnfP21237 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
BdnfP21237 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.48■□□□□ 0.71
BdnfP21237 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BdnfP21237 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
BdnfP21237 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BdnfP21237 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BdnfP21237 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
BdnfP21237 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BdnfP21237 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BdnfP21237 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
BdnfP21237 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.47■□□□□ 0.71
BdnfP21237 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BdnfP21237 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BdnfP21237 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.47■□□□□ 0.71
BdnfP21237 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
BdnfP21237 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
BdnfP21237 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BdnfP21237 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.47■□□□□ 0.71
BdnfP21237 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
BdnfP21237 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.47■□□□□ 0.71
BdnfP21237 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
BdnfP21237 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
BdnfP21237 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BdnfP21237 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BdnfP21237 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.46■□□□□ 0.71
BdnfP21237 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.46■□□□□ 0.71
BdnfP21237 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.46■□□□□ 0.71
BdnfP21237 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BdnfP21237 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.46■□□□□ 0.71
BdnfP21237 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BdnfP21237 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BdnfP21237 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BdnfP21237 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BdnfP21237 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BdnfP21237 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BdnfP21237 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BdnfP21237 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BdnfP21237 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BdnfP21237 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
BdnfP21237 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BdnfP21237 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
BdnfP21237 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BdnfP21237 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BdnfP21237 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BdnfP21237 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BdnfP21237 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
BdnfP21237 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BdnfP21237 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
BdnfP21237 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BdnfP21237 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BdnfP21237 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BdnfP21237 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BdnfP21237 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
BdnfP21237 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BdnfP21237 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms