Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgn1P18608 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Hmgn1P18608 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgn1P18608 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgn1P18608 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgn1P18608 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Hmgn1P18608 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgn1P18608 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgn1P18608 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Hmgn1P18608 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgn1P18608 Golph3-202ENSMUST00000226517 2359 ntBASIC18.7■□□□□ 0.58
Hmgn1P18608 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Hmgn1P18608 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgn1P18608 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgn1P18608 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgn1P18608 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgn1P18608 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.7■□□□□ 0.58
Hmgn1P18608 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgn1P18608 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgn1P18608 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmgn1P18608 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmgn1P18608 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmgn1P18608 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.69■□□□□ 0.58
Hmgn1P18608 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.69■□□□□ 0.58
Hmgn1P18608 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmgn1P18608 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmgn1P18608 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmgn1P18608 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmgn1P18608 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmgn1P18608 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hmgn1P18608 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hmgn1P18608 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.68■□□□□ 0.58
Hmgn1P18608 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Hmgn1P18608 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Hmgn1P18608 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.68■□□□□ 0.58
Hmgn1P18608 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.68■□□□□ 0.58
Hmgn1P18608 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Hmgn1P18608 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Hmgn1P18608 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hmgn1P18608 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hmgn1P18608 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hmgn1P18608 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.68■□□□□ 0.58
Hmgn1P18608 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hmgn1P18608 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.68■□□□□ 0.58
Hmgn1P18608 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.68■□□□□ 0.58
Hmgn1P18608 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hmgn1P18608 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Hmgn1P18608 Gm27502-201ENSMUST00000183495 199 ntBASIC18.67■□□□□ 0.58
Hmgn1P18608 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmgn1P18608 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hmgn1P18608 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn1P18608 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn1P18608 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn1P18608 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn1P18608 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn1P18608 Iqck-206ENSMUST00000208658 2891 ntBASIC18.66■□□□□ 0.58
Hmgn1P18608 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn1P18608 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn1P18608 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn1P18608 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Hmgn1P18608 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn1P18608 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn1P18608 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn1P18608 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Hmgn1P18608 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Hmgn1P18608 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn1P18608 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn1P18608 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hmgn1P18608 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn1P18608 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn1P18608 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn1P18608 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn1P18608 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn1P18608 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn1P18608 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn1P18608 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn1P18608 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn1P18608 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn1P18608 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn1P18608 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn1P18608 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn1P18608 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hmgn1P18608 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.64■□□□□ 0.58
Hmgn1P18608 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Hmgn1P18608 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn1P18608 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.64■□□□□ 0.57
Hmgn1P18608 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn1P18608 Gm7332-201ENSMUST00000118351 454 ntBASIC18.64■□□□□ 0.57
Hmgn1P18608 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn1P18608 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn1P18608 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn1P18608 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn1P18608 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn1P18608 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn1P18608 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn1P18608 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn1P18608 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn1P18608 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.63■□□□□ 0.57
Hmgn1P18608 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Hmgn1P18608 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms