Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.22■□□□□ 0.51
P06344 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P06344 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
P06344 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P06344 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.22■□□□□ 0.51
P06344 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P06344 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
P06344 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
P06344 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
P06344 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
P06344 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
P06344 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
P06344 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
P06344 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P06344 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.2■□□□□ 0.5
P06344 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
P06344 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
P06344 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P06344 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P06344 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P06344 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P06344 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P06344 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
P06344 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
P06344 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P06344 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P06344 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P06344 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
P06344 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
P06344 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.19■□□□□ 0.5
P06344 Gm7143-201ENSMUST00000222811 859 ntBASIC18.19■□□□□ 0.5
P06344 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.19■□□□□ 0.5
P06344 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P06344 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
P06344 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.19■□□□□ 0.5
P06344 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P06344 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
P06344 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
P06344 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.18■□□□□ 0.5
P06344 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P06344 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P06344 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.18■□□□□ 0.5
P06344 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
P06344 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.18■□□□□ 0.5
P06344 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P06344 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
P06344 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P06344 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P06344 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P06344 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
P06344 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P06344 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.17■□□□□ 0.5
P06344 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.17■□□□□ 0.5
P06344 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.17■□□□□ 0.5
P06344 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
P06344 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
P06344 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
P06344 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
P06344 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.16■□□□□ 0.5
P06344 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P06344 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
P06344 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.16■□□□□ 0.5
P06344 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
P06344 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
P06344 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P06344 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.16■□□□□ 0.5
P06344 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
P06344 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
P06344 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
P06344 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.15■□□□□ 0.5
P06344 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
P06344 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
P06344 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
P06344 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P06344 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P06344 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P06344 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
P06344 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
P06344 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
P06344 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
P06344 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
P06344 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
P06344 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
P06344 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
P06344 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
P06344 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
P06344 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
P06344 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
P06344 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.14■□□□□ 0.49
P06344 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.13■□□□□ 0.49
P06344 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.13■□□□□ 0.49
P06344 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P06344 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
P06344 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P06344 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
P06344 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.12■□□□□ 0.49
P06344 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.12■□□□□ 0.49
P06344 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
P06344 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
P06344 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms