Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxa3P02831 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Hoxa3P02831 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Hoxa3P02831 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.08■□□□□ 0.32
Hoxa3P02831 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Hoxa3P02831 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxa3P02831 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxa3P02831 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxa3P02831 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxa3P02831 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxa3P02831 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxa3P02831 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxa3P02831 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Hoxa3P02831 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxa3P02831 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxa3P02831 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxa3P02831 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxa3P02831 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Hoxa3P02831 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxa3P02831 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.06■□□□□ 0.32
Hoxa3P02831 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxa3P02831 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Hoxa3P02831 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa3P02831 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa3P02831 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa3P02831 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa3P02831 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa3P02831 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa3P02831 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.05■□□□□ 0.32
Hoxa3P02831 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa3P02831 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
Hoxa3P02831 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa3P02831 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa3P02831 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.05■□□□□ 0.32
Hoxa3P02831 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa3P02831 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa3P02831 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxa3P02831 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxa3P02831 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxa3P02831 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxa3P02831 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.04■□□□□ 0.32
Hoxa3P02831 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.04■□□□□ 0.32
Hoxa3P02831 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxa3P02831 Gm9870-201ENSMUST00000063874 645 ntBASIC17.04■□□□□ 0.32
Hoxa3P02831 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.04■□□□□ 0.32
Hoxa3P02831 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxa3P02831 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxa3P02831 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxa3P02831 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxa3P02831 Gm27454-201ENSMUST00000185090 204 ntBASIC17.03■□□□□ 0.32
Hoxa3P02831 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxa3P02831 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxa3P02831 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxa3P02831 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxa3P02831 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxa3P02831 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxa3P02831 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Hoxa3P02831 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.02■□□□□ 0.32
Hoxa3P02831 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxa3P02831 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hoxa3P02831 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hoxa3P02831 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Hoxa3P02831 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.02■□□□□ 0.31
Hoxa3P02831 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hoxa3P02831 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hoxa3P02831 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
Hoxa3P02831 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxa3P02831 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxa3P02831 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxa3P02831 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxa3P02831 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.01■□□□□ 0.31
Hoxa3P02831 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxa3P02831 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.01■□□□□ 0.31
Hoxa3P02831 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hoxa3P02831 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Hoxa3P02831 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxa3P02831 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17■□□□□ 0.31
Hoxa3P02831 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Hoxa3P02831 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hoxa3P02831 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxa3P02831 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17■□□□□ 0.31
Hoxa3P02831 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17■□□□□ 0.31
Hoxa3P02831 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hoxa3P02831 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17■□□□□ 0.31
Hoxa3P02831 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17■□□□□ 0.31
Hoxa3P02831 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxa3P02831 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxa3P02831 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hoxa3P02831 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxa3P02831 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxa3P02831 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxa3P02831 Gm12821-201ENSMUST00000120022 600 ntBASIC16.99■□□□□ 0.31
Hoxa3P02831 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxa3P02831 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxa3P02831 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Hoxa3P02831 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxa3P02831 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxa3P02831 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxa3P02831 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxa3P02831 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms