Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ClppO88696 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.79■□□□□ 0.76
ClppO88696 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ClppO88696 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
ClppO88696 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ClppO88696 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.79■□□□□ 0.76
ClppO88696 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ClppO88696 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ClppO88696 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ClppO88696 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ClppO88696 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ClppO88696 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ClppO88696 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ClppO88696 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ClppO88696 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ClppO88696 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ClppO88696 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
ClppO88696 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ClppO88696 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ClppO88696 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ClppO88696 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ClppO88696 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ClppO88696 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ClppO88696 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ClppO88696 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ClppO88696 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
ClppO88696 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.77■□□□□ 0.75
ClppO88696 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClppO88696 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
ClppO88696 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ClppO88696 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClppO88696 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ClppO88696 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClppO88696 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClppO88696 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.76■□□□□ 0.75
ClppO88696 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.75■□□□□ 0.75
ClppO88696 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClppO88696 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ClppO88696 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClppO88696 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.75■□□□□ 0.75
ClppO88696 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClppO88696 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ClppO88696 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.75■□□□□ 0.75
ClppO88696 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ClppO88696 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClppO88696 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
ClppO88696 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ClppO88696 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ClppO88696 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ClppO88696 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ClppO88696 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ClppO88696 Gm9870-201ENSMUST00000063874 645 ntBASIC19.74■□□□□ 0.75
ClppO88696 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ClppO88696 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ClppO88696 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ClppO88696 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ClppO88696 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ClppO88696 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ClppO88696 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ClppO88696 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ClppO88696 Gm27454-201ENSMUST00000185090 204 ntBASIC19.73■□□□□ 0.75
ClppO88696 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ClppO88696 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ClppO88696 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ClppO88696 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ClppO88696 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ClppO88696 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ClppO88696 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ClppO88696 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.72■□□□□ 0.75
ClppO88696 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ClppO88696 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ClppO88696 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ClppO88696 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ClppO88696 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.72■□□□□ 0.75
ClppO88696 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
ClppO88696 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClppO88696 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClppO88696 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClppO88696 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClppO88696 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ClppO88696 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ClppO88696 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClppO88696 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClppO88696 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClppO88696 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClppO88696 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ClppO88696 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ClppO88696 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.7■□□□□ 0.74
ClppO88696 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ClppO88696 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ClppO88696 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.7■□□□□ 0.74
ClppO88696 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ClppO88696 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ClppO88696 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ClppO88696 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ClppO88696 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ClppO88696 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ClppO88696 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ClppO88696 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ClppO88696 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 917.9 ms