Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cops4O88544 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops4O88544 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops4O88544 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.79■□□□□ 0.6
Cops4O88544 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops4O88544 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cops4O88544 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cops4O88544 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cops4O88544 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cops4O88544 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cops4O88544 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cops4O88544 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cops4O88544 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cops4O88544 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cops4O88544 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cops4O88544 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cops4O88544 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cops4O88544 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cops4O88544 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cops4O88544 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cops4O88544 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cops4O88544 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.77■□□□□ 0.6
Cops4O88544 Gm14523-201ENSMUST00000117260 558 ntBASIC18.77■□□□□ 0.6
Cops4O88544 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.77■□□□□ 0.6
Cops4O88544 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cops4O88544 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cops4O88544 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cops4O88544 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cops4O88544 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cops4O88544 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Cops4O88544 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.77■□□□□ 0.59
Cops4O88544 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cops4O88544 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cops4O88544 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cops4O88544 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cops4O88544 Gm7332-201ENSMUST00000118351 454 ntBASIC18.76■□□□□ 0.59
Cops4O88544 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cops4O88544 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cops4O88544 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cops4O88544 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cops4O88544 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cops4O88544 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cops4O88544 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cops4O88544 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cops4O88544 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cops4O88544 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.75■□□□□ 0.59
Cops4O88544 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cops4O88544 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cops4O88544 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.75■□□□□ 0.59
Cops4O88544 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cops4O88544 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cops4O88544 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cops4O88544 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cops4O88544 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.75■□□□□ 0.59
Cops4O88544 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cops4O88544 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cops4O88544 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cops4O88544 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cops4O88544 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cops4O88544 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cops4O88544 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.74■□□□□ 0.59
Cops4O88544 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cops4O88544 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cops4O88544 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cops4O88544 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cops4O88544 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cops4O88544 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.73■□□□□ 0.59
Cops4O88544 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cops4O88544 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cops4O88544 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cops4O88544 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cops4O88544 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cops4O88544 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cops4O88544 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.73■□□□□ 0.59
Cops4O88544 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cops4O88544 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cops4O88544 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cops4O88544 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cops4O88544 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cops4O88544 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cops4O88544 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cops4O88544 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.72■□□□□ 0.59
Cops4O88544 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cops4O88544 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cops4O88544 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cops4O88544 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cops4O88544 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cops4O88544 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Cops4O88544 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cops4O88544 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cops4O88544 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cops4O88544 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.71■□□□□ 0.59
Cops4O88544 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cops4O88544 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.71■□□□□ 0.59
Cops4O88544 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cops4O88544 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cops4O88544 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cops4O88544 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cops4O88544 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Cops4O88544 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms