Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.04■□□□□ 0.64
Tulp3O88413 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.03■□□□□ 0.64
Tulp3O88413 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tulp3O88413 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Tulp3O88413 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tulp3O88413 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tulp3O88413 Gm14523-201ENSMUST00000117260 558 ntBASIC19.03■□□□□ 0.64
Tulp3O88413 Gm27502-201ENSMUST00000183495 199 ntBASIC19.03■□□□□ 0.64
Tulp3O88413 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tulp3O88413 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tulp3O88413 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tulp3O88413 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tulp3O88413 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tulp3O88413 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tulp3O88413 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Tulp3O88413 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tulp3O88413 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tulp3O88413 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tulp3O88413 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tulp3O88413 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.02■□□□□ 0.64
Tulp3O88413 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tulp3O88413 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Tulp3O88413 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tulp3O88413 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.02■□□□□ 0.63
Tulp3O88413 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tulp3O88413 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tulp3O88413 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tulp3O88413 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tulp3O88413 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tulp3O88413 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tulp3O88413 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tulp3O88413 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Tulp3O88413 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tulp3O88413 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19■□□□□ 0.63
Tulp3O88413 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tulp3O88413 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tulp3O88413 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19■□□□□ 0.63
Tulp3O88413 Gm43592-201ENSMUST00000196922 1165 ntBASIC19■□□□□ 0.63
Tulp3O88413 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19■□□□□ 0.63
Tulp3O88413 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19■□□□□ 0.63
Tulp3O88413 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tulp3O88413 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Tulp3O88413 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tulp3O88413 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tulp3O88413 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tulp3O88413 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tulp3O88413 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tulp3O88413 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tulp3O88413 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tulp3O88413 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tulp3O88413 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.99■□□□□ 0.63
Tulp3O88413 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tulp3O88413 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tulp3O88413 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tulp3O88413 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tulp3O88413 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tulp3O88413 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tulp3O88413 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tulp3O88413 Iqck-206ENSMUST00000208658 2891 ntBASIC18.98■□□□□ 0.63
Tulp3O88413 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Tulp3O88413 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.98■□□□□ 0.63
Tulp3O88413 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.98■□□□□ 0.63
Tulp3O88413 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tulp3O88413 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Tulp3O88413 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tulp3O88413 Gm7332-201ENSMUST00000118351 454 ntBASIC18.97■□□□□ 0.63
Tulp3O88413 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.97■□□□□ 0.63
Tulp3O88413 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Tulp3O88413 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tulp3O88413 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Tulp3O88413 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tulp3O88413 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tulp3O88413 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tulp3O88413 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Tulp3O88413 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tulp3O88413 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tulp3O88413 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tulp3O88413 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tulp3O88413 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tulp3O88413 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tulp3O88413 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Tulp3O88413 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tulp3O88413 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Tulp3O88413 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Tulp3O88413 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tulp3O88413 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tulp3O88413 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tulp3O88413 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Tulp3O88413 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tulp3O88413 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Tulp3O88413 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tulp3O88413 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tulp3O88413 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tulp3O88413 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tulp3O88413 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Tulp3O88413 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Tulp3O88413 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Tulp3O88413 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tulp3O88413 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tulp3O88413 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms