Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Cntnap1O54991 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC27.27■■□□□ 1.96
Cntnap1O54991 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Cntnap1O54991 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Cntnap1O54991 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC27.27■■□□□ 1.96
Cntnap1O54991 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Cntnap1O54991 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
Cntnap1O54991 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC27.25■■□□□ 1.95
Cntnap1O54991 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Cntnap1O54991 Gm29241-201ENSMUST00000189260 1096 ntBASIC27.24■■□□□ 1.95
Cntnap1O54991 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Cntnap1O54991 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Cntnap1O54991 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Cntnap1O54991 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Cntnap1O54991 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Cntnap1O54991 Reep4-203ENSMUST00000226563 1444 ntBASIC27.23■■□□□ 1.95
Cntnap1O54991 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Cntnap1O54991 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
Cntnap1O54991 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC27.22■■□□□ 1.95
Cntnap1O54991 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
Cntnap1O54991 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Cntnap1O54991 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cntnap1O54991 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cntnap1O54991 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cntnap1O54991 Gm13836-201ENSMUST00000121159 501 ntBASIC27.21■■□□□ 1.95
Cntnap1O54991 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cntnap1O54991 Gm7514-201ENSMUST00000209475 934 ntBASIC27.21■■□□□ 1.95
Cntnap1O54991 Gm10812-201ENSMUST00000099864 546 ntBASIC27.21■■□□□ 1.95
Cntnap1O54991 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Cntnap1O54991 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
Cntnap1O54991 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC27.2■■□□□ 1.94
Cntnap1O54991 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.94
Cntnap1O54991 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
Cntnap1O54991 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Cntnap1O54991 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Cntnap1O54991 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Cntnap1O54991 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
Cntnap1O54991 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
Cntnap1O54991 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Cntnap1O54991 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Cntnap1O54991 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Cntnap1O54991 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC27.19■■□□□ 1.94
Cntnap1O54991 Gm3807-201ENSMUST00000193520 1168 ntBASIC27.19■■□□□ 1.94
Cntnap1O54991 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Cntnap1O54991 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Cntnap1O54991 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Cntnap1O54991 Gm14281-201ENSMUST00000121700 1294 ntBASIC27.18■■□□□ 1.94
Cntnap1O54991 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC27.18■■□□□ 1.94
Cntnap1O54991 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Cntnap1O54991 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC27.18■■□□□ 1.94
Cntnap1O54991 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC27.18■■□□□ 1.94
Cntnap1O54991 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
Cntnap1O54991 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC27.17■■□□□ 1.94
Cntnap1O54991 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC27.17■■□□□ 1.94
Cntnap1O54991 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
Cntnap1O54991 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Cntnap1O54991 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Cntnap1O54991 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Cntnap1O54991 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Cntnap1O54991 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Cntnap1O54991 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Cntnap1O54991 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Cntnap1O54991 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Cntnap1O54991 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Cntnap1O54991 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Cntnap1O54991 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Cntnap1O54991 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
Cntnap1O54991 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Cntnap1O54991 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Cntnap1O54991 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cntnap1O54991 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cntnap1O54991 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cntnap1O54991 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cntnap1O54991 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
Cntnap1O54991 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cntnap1O54991 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC27.15■■□□□ 1.94
Cntnap1O54991 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC27.15■■□□□ 1.94
Cntnap1O54991 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
Cntnap1O54991 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Cntnap1O54991 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Cntnap1O54991 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC27.14■■□□□ 1.93
Cntnap1O54991 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.93
Cntnap1O54991 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC27.13■■□□□ 1.93
Cntnap1O54991 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Cntnap1O54991 Gm42699-201ENSMUST00000198104 1657 ntBASIC27.13■■□□□ 1.93
Cntnap1O54991 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC27.13■■□□□ 1.93
Cntnap1O54991 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Cntnap1O54991 Gm43859-201ENSMUST00000200075 1412 ntBASIC27.13■■□□□ 1.93
Cntnap1O54991 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Cntnap1O54991 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
Cntnap1O54991 Gm13181-201ENSMUST00000120117 1069 ntBASIC27.12■■□□□ 1.93
Cntnap1O54991 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC27.12■■□□□ 1.93
Cntnap1O54991 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Cntnap1O54991 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Cntnap1O54991 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Cntnap1O54991 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cntnap1O54991 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
Cntnap1O54991 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
Cntnap1O54991 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
Cntnap1O54991 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms