Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
DffbO54788 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
DffbO54788 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DffbO54788 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DffbO54788 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DffbO54788 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DffbO54788 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
DffbO54788 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DffbO54788 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DffbO54788 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DffbO54788 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
DffbO54788 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DffbO54788 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.46■□□□□ 0.39
DffbO54788 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DffbO54788 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
DffbO54788 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.46■□□□□ 0.38
DffbO54788 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
DffbO54788 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DffbO54788 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DffbO54788 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DffbO54788 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DffbO54788 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DffbO54788 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.45■□□□□ 0.38
DffbO54788 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DffbO54788 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DffbO54788 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
DffbO54788 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DffbO54788 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DffbO54788 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.45■□□□□ 0.38
DffbO54788 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DffbO54788 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.45■□□□□ 0.38
DffbO54788 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DffbO54788 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DffbO54788 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
DffbO54788 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
DffbO54788 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DffbO54788 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DffbO54788 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
DffbO54788 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DffbO54788 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
DffbO54788 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
DffbO54788 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.44■□□□□ 0.38
DffbO54788 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DffbO54788 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DffbO54788 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
DffbO54788 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
DffbO54788 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DffbO54788 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DffbO54788 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DffbO54788 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
DffbO54788 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DffbO54788 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DffbO54788 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.43■□□□□ 0.38
DffbO54788 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DffbO54788 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.43■□□□□ 0.38
DffbO54788 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DffbO54788 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DffbO54788 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
DffbO54788 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DffbO54788 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DffbO54788 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DffbO54788 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DffbO54788 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DffbO54788 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DffbO54788 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DffbO54788 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DffbO54788 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DffbO54788 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DffbO54788 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DffbO54788 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.41■□□□□ 0.38
DffbO54788 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
DffbO54788 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DffbO54788 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.41■□□□□ 0.38
DffbO54788 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DffbO54788 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DffbO54788 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DffbO54788 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DffbO54788 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.4■□□□□ 0.38
DffbO54788 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DffbO54788 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DffbO54788 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
DffbO54788 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.4■□□□□ 0.38
DffbO54788 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DffbO54788 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
DffbO54788 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
DffbO54788 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
DffbO54788 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
DffbO54788 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DffbO54788 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
DffbO54788 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
DffbO54788 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
DffbO54788 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DffbO54788 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DffbO54788 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
DffbO54788 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DffbO54788 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DffbO54788 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DffbO54788 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DffbO54788 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.39■□□□□ 0.37
DffbO54788 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms