Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Alx4O35137 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Alx4O35137 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Alx4O35137 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Alx4O35137 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Alx4O35137 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.25■□□□□ 0.51
Alx4O35137 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Alx4O35137 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Alx4O35137 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.25■□□□□ 0.51
Alx4O35137 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Alx4O35137 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.25■□□□□ 0.51
Alx4O35137 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Alx4O35137 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Alx4O35137 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Alx4O35137 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Alx4O35137 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Alx4O35137 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.24■□□□□ 0.51
Alx4O35137 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Alx4O35137 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Alx4O35137 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Alx4O35137 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Alx4O35137 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Alx4O35137 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Alx4O35137 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.23■□□□□ 0.51
Alx4O35137 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Alx4O35137 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Alx4O35137 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Alx4O35137 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.23■□□□□ 0.51
Alx4O35137 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Alx4O35137 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Alx4O35137 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Alx4O35137 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Alx4O35137 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Alx4O35137 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Alx4O35137 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Alx4O35137 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Alx4O35137 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Alx4O35137 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.22■□□□□ 0.51
Alx4O35137 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Alx4O35137 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.22■□□□□ 0.51
Alx4O35137 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Alx4O35137 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Alx4O35137 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Alx4O35137 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Alx4O35137 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Alx4O35137 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Alx4O35137 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.21■□□□□ 0.51
Alx4O35137 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Alx4O35137 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.21■□□□□ 0.5
Alx4O35137 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alx4O35137 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alx4O35137 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alx4O35137 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alx4O35137 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.2■□□□□ 0.5
Alx4O35137 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alx4O35137 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Alx4O35137 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alx4O35137 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alx4O35137 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alx4O35137 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alx4O35137 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Alx4O35137 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Alx4O35137 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alx4O35137 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Alx4O35137 Golph3-202ENSMUST00000226517 2359 ntBASIC18.19■□□□□ 0.5
Alx4O35137 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx4O35137 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx4O35137 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.18■□□□□ 0.5
Alx4O35137 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx4O35137 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx4O35137 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.18■□□□□ 0.5
Alx4O35137 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx4O35137 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx4O35137 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Alx4O35137 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx4O35137 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.17■□□□□ 0.5
Alx4O35137 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alx4O35137 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alx4O35137 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alx4O35137 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.17■□□□□ 0.5
Alx4O35137 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Alx4O35137 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alx4O35137 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Alx4O35137 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Alx4O35137 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alx4O35137 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Alx4O35137 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alx4O35137 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alx4O35137 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alx4O35137 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.16■□□□□ 0.5
Alx4O35137 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Alx4O35137 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alx4O35137 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Alx4O35137 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alx4O35137 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.16■□□□□ 0.5
Alx4O35137 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alx4O35137 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alx4O35137 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Alx4O35137 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alx4O35137 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms